| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1575 |
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| Symbol | |
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| ID | 3705794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1748846 |
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| End bp | 1750342 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637738055 |
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| Product | Sodium/proline symporter |
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| Protein accession | YP_343584 |
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| Protein GI | 77165059 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0675536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGTCA CTTTTATCAT TTACCTCGCC GTCATGCTGC TGCTTGGCCT GCTGGCCTAC
GTCCGGACCC GGGATTTATC CGACTATATC CTTGGGGGCC GCAAGCTCGG AAGTTGGACC
ACTGCCTTGA GTGCAGGGGC TTCTGACATG AGTGGTTGGC TCCTTTTGGG ACTACCTGGC
TACGCTTATC TTCATGGCTT GGAAGCTGGC TGGATTGCCC TCGGTTTATG GTTGGGCACC
TATGGCAACT GGCGCCTGGT GGCTGCCCGG TTGCGGGCCT ATTCCACGGC TGCTGGAGAT
TCACTCACCT TGCCGGAATT TTTGGCTCAG CGCTTTCATG ATCATCGCCA TCTGCTACGC
TGCGTTGCGG CAGCTTTCAT TCTGATTTTT TTCTTGTTTT ATACCAGTGC AGGCTTGGTG
GCGGGGGGAA AACTGTTCAA CGCCGTCTTC GGTCTACCCT ATACGTGGGC CGTAACCGCC
GGTACCCTGG CCATTATGAG CTATACTTTC GTCGGGGGAT TTCTCGCCGT CTCCTGGACC
GACCTGGTGC AGGGCCTATT GATGCTGCTC GCCCTGCTCG CCGTTCCTGT GGTCGCCATT
CTCCACCTGG GGGGCTGGCA GGCCACCTTG GCCGGCATTG ATGCTGAACG GCTCTACCTG
TTTGTAGCGA CGACCGATGA GCCCCTAGGG GCTATCGCTA TTCTCTCCCT GCTAGGATGG
GGGTTAGGGT ATTTCGGCCA ACCTCATATT CAGGTTCGTT TCATGGCCAT TCATTCCCTT
AACGCCGTGC CCCAGGCGCG GCGGATCGCC ATGGGTTGGG TGACCCTGAC CTTAATCGGC
GCCCTCTTGG TGGGAATTAC GGGAGCCTCC TTCTTACATC CACCCCTTTC CACGGCTGAC
AGCGAAAAAG TATTCATTGA AATGGTCAGT ATCCTCTTCC ACCCCTTGCC TGCCGGAGTC
CTACTAGCCG CTATCCTGGC AGCTATAATG AGCACCACCG ATTCCCAACT ATTGGTCTGC
TCGGCGGTAT TTACCGATGA CTTTTATAAA GCCCTCCTGC GCCATCAAGC AAGTGCTCGG
GAATTGGTCT ATGTGAGCCG GGCCACCGTC GTCATCATTG CTTCCCTGGC ATTATGGCTA
GCCCTCGATC CGGAAAGCCA AGTTTTGGAA CTAGTGGCCT ATGCCTGGGC TGGGTTTGGC
GCTGCTTTTG GCCCCACCCT CCTCATGGCC CTTTACTGGA AACGAATGAC CCGACAAGGA
GCACTAGCTG GAATTATCGT GGGAGGAATG ACGATTTTAT TATGGAAGCA GTTAAACGGG
GGAATTTTTG ACCTCTACGA ACTGGTGCCC GGCTTTATTT TCTCAGCTAT CGCCATTGTC
GGCGCTAGTT TGCTAAGCAC CGCCCCTGGA ATCGAGATCG AACGGCAATT TAATGCGATT
GCTAACAATA CCAAGCCTTT TAATACAAAC AATAATACTG AGGATCGCCA AACCTAA
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| Protein sequence | MIVTFIIYLA VMLLLGLLAY VRTRDLSDYI LGGRKLGSWT TALSAGASDM SGWLLLGLPG
YAYLHGLEAG WIALGLWLGT YGNWRLVAAR LRAYSTAAGD SLTLPEFLAQ RFHDHRHLLR
CVAAAFILIF FLFYTSAGLV AGGKLFNAVF GLPYTWAVTA GTLAIMSYTF VGGFLAVSWT
DLVQGLLMLL ALLAVPVVAI LHLGGWQATL AGIDAERLYL FVATTDEPLG AIAILSLLGW
GLGYFGQPHI QVRFMAIHSL NAVPQARRIA MGWVTLTLIG ALLVGITGAS FLHPPLSTAD
SEKVFIEMVS ILFHPLPAGV LLAAILAAIM STTDSQLLVC SAVFTDDFYK ALLRHQASAR
ELVYVSRATV VIIASLALWL ALDPESQVLE LVAYAWAGFG AAFGPTLLMA LYWKRMTRQG
ALAGIIVGGM TILLWKQLNG GIFDLYELVP GFIFSAIAIV GASLLSTAPG IEIERQFNAI
ANNTKPFNTN NNTEDRQT
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