| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1572 |
|---|
| Symbol | |
|---|
| ID | 3705791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1746561 |
|---|
| End bp | 1747526 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637738052 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_343581 |
|---|
| Protein GI | 77165056 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0369731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAG ACCACCTGCT GAAACATAGA ATAACGAATT GGCTCCAGTC CGCGTTATTG
TTACTAGGCA TGATTCTATT GCTTGCCATG CCCGGATGGT TTTTAGGGGG GCCTCTATTC
ATGATAGGGA CTGTGGCGAG CGGTATATTC CTACTGGCAC TTGGTCCCAA AATCCCACCC
CGCTTGCTCC TTGGCATGTA CGGGGGCCGC CGTCTAACAC CCTACGATGC CCCTCAGCTT
TACACACTCG CTCAGGAATT AGCAAAACGG GCTGGCCTAT TACAAACACC CGTTCTCTAT
TATATCCCTA GCCAGATTAT AAACGCATTT ACAGTGGGGA AGCGTACCGA CGCCGTCATT
GCTATTACCG ATGGCCTATT ACGTCAACTT ACCTTACGGG AATTGGCGGG AGTGCTGGCG
CATGAAATTG GTCATATTCG CAACAATGAT ATATGGGTCA TGACACTCGC CGATCTAGCC
AGTCGCATGA CCCATGCCCT CTCCCTTCTT GGGCAACTGT TAGTAGTGAT TAATCTACCT
TTATTTTTGT TGACCAAAAC GAGTCTTTCG TGGCTTGCCA TCCTGCTGCT CATCCTTGCC
CCCACTATCA GCGCGTTACT GCAACTCGCC CTCTCCCGAA CTCGCGAATT TGACGCTGAT
TTAAGCGCCG TTAATCTTAC GGGAGATCCC CAAGGTCTTG CCTCAGCGCT AGTTAAATTA
GAACGGCAAC ATAGGGGATT GCTGGAACGT CTGCTGACGC CAGATCGCCA TAGCCCAGAG
CCCTCATTAC TCCGCACCCA TCCTCGAACT GAAGAACGCA TACAACGGCT TTTATCGTTG
AAGCCGAAAC CGCCCGCTAG CGCTTCCTTC GTGCCTAGCC TAGGGGAGGC TACCTTCCAA
CTCCCCCCGC ATTTTATTCG GGTAAGAAGA AAACCTCATT GGCATATTAC GGGTCTTTGG
CATTGA
|
|---|
| Protein sequence | MQTDHLLKHR ITNWLQSALL LLGMILLLAM PGWFLGGPLF MIGTVASGIF LLALGPKIPP
RLLLGMYGGR RLTPYDAPQL YTLAQELAKR AGLLQTPVLY YIPSQIINAF TVGKRTDAVI
AITDGLLRQL TLRELAGVLA HEIGHIRNND IWVMTLADLA SRMTHALSLL GQLLVVINLP
LFLLTKTSLS WLAILLLILA PTISALLQLA LSRTREFDAD LSAVNLTGDP QGLASALVKL
ERQHRGLLER LLTPDRHSPE PSLLRTHPRT EERIQRLLSL KPKPPASASF VPSLGEATFQ
LPPHFIRVRR KPHWHITGLW H
|
|---|
| |