| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1530 |
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| Symbol | |
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| ID | 3705827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1694738 |
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| End bp | 1697941 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637738016 |
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| Product | heavy metal efflux pump |
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| Protein accession | YP_343545 |
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| Protein GI | 77165020 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAGT TCATTATCGA TGCTTCCCTC CGGAATAAAT TTCTGGTGCT GACGGCTACG
CTGCTGCTGC TGGCCGTGGG CCTCTGGACC CTCAAAAACA CCCCCCTGGA TGCGATCCCG
GACCTTTCCG ATGTGCAGGT CATCGTCTTT ACCGAATATC CGGGCCAGGC CCCCCAGGTG
GTGGAAGATC AGGTGACTTA TCCTCTGACC ACGGCCATGT TGGCGGTGCC CCATGCCAAG
GTGGTACGGG GCTATTCCTT CTTTGGTTTC TCTTTTGTCT ACATCATCTT CGAAGATGGC
ACTGACATGT ACTGGGCTCG CTCCCGGGTA CTGGAGTATC TTAACTATGT CCGCGGCAGG
CTCCCGGCAG GCATCAATCC TTCTTTAGGG CCCGATGCCA CGGGGGTGGG TTGGATCTAC
GAGTATGCTT TGGTGGACCG GAGCGGAAAA CACGATCTGG CCCAACTGCG CACCATTCAG
GATTGGTACC TGCGCTATCC TCTGCAGACC GTTCCGGGGG TGGCTGAAGT GGCTTCTATT
GGAGGATTCG TCAAACAATA TCAGGTGGAG GTGGACCCTA ACGCTTTGCT GGCCTACCAC
ATTCCCCTCT CCAAGGTGAA GCGGGCCATC CAACGTTCCA ATCAGGATGT GGGCGGGCGT
TTGGTGGAAA TGGCGGAGAC CGAGTACATG GTTCGTGGTC TCGGCTATAT CCAGTCCATT
GAAGATATCA ACGATATTCC GCTGGGGGTG GATAGGCAAG GCACGCCTAT CCGTATCGCA
GATGTGGCCC ATGTCCACTT AGGGCCTGAA TTGCGCCGCG GCCTGGCCGA ACTCAATGGC
GAAGGGGAAG TGGCCGGTGG GGTGGTGGTC ATGCGTTATG GGGAAAACGC CCTGGCTACC
ATCCAGCGGG TCCGGACCAA GCTGGAGGAA CTAAAGCAGT CCCTGCCGGA AGGGGTGGAA
ATCGTACCCG TGTACGATCG GGGTGCGCTT ATCGAACGGG CGGTGGACAG TCTTCAGGAG
ACCCTTCTTC AGGAGGTGAT CATCGTCAGC CTCGTCCTTG CGCTCTTTCT ATTCCATCTC
CGTTCCTCTT TGGTGGCTAT TTTGGCCTTG CCCATGGCGG TTCTCATCGC CTTTATTATC
ATGAAAGGGC AGGGTCTCAA CGCTAACATC ATGTCCCTGG GGGGCATCGC GATTACCATT
GGCGCCATGG TGGATGCCGC TGTGGTGATG ATCGAGAACG CCCACAAGCA TCTGGAACGA
TCTGTGTTGG AGAAAGGTAG AGCGCTTACC CGCGATGAGC ACTGGGTGAC AGTGGGGATT
TCCGCCAAAG AGGTGGGACC GGCGCTGTTT TTCGCCCTGG CCATCATGAC CGTATCCTAT
TTGGCCATCT TCACTCTCGA AGCCCAGGAA GGCAGGCTAT TCAAGCCCCT GGCTTTTACG
GCGACTTATA CCATGGCGGC CGGGTCGGTG CTTGCCATCA CCCTGGTTCC CTTGCTGATG
GGTTATTTTA TCCGGGGCAA GATCCTGCCG GAGAAAAAGA ACCCGGCTAA TCGCCTCCTG
CATTTCCTGT TTGCCCCGGC AGTCCGTCAG GCTTTGCGCT TTCGTAAAAC CACATTGATT
ATTGCTTTTG TTTTACTTGG AGTGACCCTT TATCCAGTAG CTAAAACCGG CAGTGAGTTT
ATGCCGCCCC TGGATGAAGG GGATATTCTT TACATGCCGA GCGCCTATCC GGGCATCTCC
ATCACCAAAG CCAAGGAGGT GTTGCAGCAG ACCGACAAGA TCTTGAGCAC CTTTCCCGAG
GTCCACTCCG TCTTTGGTAA GGCAGGGCGG GCGGAAACGG CCACCGATCC GGCGCCCCTT
TCCATGTTTG AGACTACCGT GCAGCTCAAG CCCAAGGAAG CATGGCCAGA CCCCAGCAAA
ACGACCAAAG AATTGATGGA TGAAATGGAT GCCGCCATTC AGTTTCCAGG AATTACCAAC
GCCTGGACTA TGCCCATCAA GACCCGGATC GATATGCTCT CTACCGGTAT TAAAACGCCC
ATTGGGATTA AGGTAAGCGG ACCAGATCTG GCCGTGTTGG AACAGGTGGC CGGCGACATC
GAGCGGACGC TGAAGGCGCT TCCAGAGACC TTATCCGCTT TCGGGGATAA GGCTGCTGGG
GGCTATTACT TGGATTTCGA TATTTCTCGA GAGGAGGCGG CCCGCTATGG GCTAACGGTG
GGAGATGTGC AGGATGTGAT CCAGACCGCC ATTGGTGGAA TGAAGGTGAC GGAAACTGTC
GAGGGGCTAG AACGTTATCC GGTGAATCTG CGCTATCCCC GGGAGTCGCG CGACAACCTG
ACCCAACTGA AACGGACTTT GATCCCCACC CCCACCGGCA CCCAAATCCC TTTGTCTCAA
GTGGCTGATC TCCGGTTACA TCGAGGTCCG CCTGTGATCA AAAGCGAAAA TTCCCGGCCC
AATGCTTGGA TTTACGTGGA TATTAAGTCT TCGGATATAG GCGGCTATGT AGCCAAAGCC
AAGGAGGTAG TACAACGGGA AGTAGATATT CCACCCGGCT ACACGTTGAG TTGGTCGGGT
CAGTATGAGT ACATGGCGCG GGCGGCCGAG CGGTTGCAAA TCGTGGTGCC GTTGACCCTG
TTGATTATTT TTTTGCTGCT GTATTTTAAT TTCCGCAATG TGACTGAACC GCTACTCGTG
ATGGGCTTTA TTCCCTTCAA CCTCATTGGC GGTTTCTGGT TGCTATATTG GCTAGATTTT
AATCTGTCTG TGGCCGTAGG AGTGGGATTC ATTGCCTTGG CGGGTATAGG GGCTGAAACG
GCGGTGCTAA AATTGACCTT TATCGACCAG GAACTGGCCC AGCGCCGTCA AGCCAAGCTA
AAAAAGCGCC AGGAGGGAGA AAATACGCCT CCTTCCTCCA AGGTTCTGCG CTTGTCGTCC
AAGGAGATCA TGTCGGCGGC CTATGCGGGG ACCATGGGGC GGGTACGTCC CGTCTTCATG
GCTGATTTTT CCACTATTGC AGGTCTTTTG CCTATCATGT GGAGCTCGGG CACGGGAGCT
GAGACTATGC AGCGAATCGC CGCCCCCATG GTAGGGGGAT TGGTGAGTGT CATGATTCTC
AACTTACTGG TATTGCCCGT GTTTTATGGG ATGATTTTAC AAGCTCGGGA AAGGTTTCGC
GGACAGTTCA AAGATGGGCT CTGA
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| Protein sequence | MIKFIIDASL RNKFLVLTAT LLLLAVGLWT LKNTPLDAIP DLSDVQVIVF TEYPGQAPQV
VEDQVTYPLT TAMLAVPHAK VVRGYSFFGF SFVYIIFEDG TDMYWARSRV LEYLNYVRGR
LPAGINPSLG PDATGVGWIY EYALVDRSGK HDLAQLRTIQ DWYLRYPLQT VPGVAEVASI
GGFVKQYQVE VDPNALLAYH IPLSKVKRAI QRSNQDVGGR LVEMAETEYM VRGLGYIQSI
EDINDIPLGV DRQGTPIRIA DVAHVHLGPE LRRGLAELNG EGEVAGGVVV MRYGENALAT
IQRVRTKLEE LKQSLPEGVE IVPVYDRGAL IERAVDSLQE TLLQEVIIVS LVLALFLFHL
RSSLVAILAL PMAVLIAFII MKGQGLNANI MSLGGIAITI GAMVDAAVVM IENAHKHLER
SVLEKGRALT RDEHWVTVGI SAKEVGPALF FALAIMTVSY LAIFTLEAQE GRLFKPLAFT
ATYTMAAGSV LAITLVPLLM GYFIRGKILP EKKNPANRLL HFLFAPAVRQ ALRFRKTTLI
IAFVLLGVTL YPVAKTGSEF MPPLDEGDIL YMPSAYPGIS ITKAKEVLQQ TDKILSTFPE
VHSVFGKAGR AETATDPAPL SMFETTVQLK PKEAWPDPSK TTKELMDEMD AAIQFPGITN
AWTMPIKTRI DMLSTGIKTP IGIKVSGPDL AVLEQVAGDI ERTLKALPET LSAFGDKAAG
GYYLDFDISR EEAARYGLTV GDVQDVIQTA IGGMKVTETV EGLERYPVNL RYPRESRDNL
TQLKRTLIPT PTGTQIPLSQ VADLRLHRGP PVIKSENSRP NAWIYVDIKS SDIGGYVAKA
KEVVQREVDI PPGYTLSWSG QYEYMARAAE RLQIVVPLTL LIIFLLLYFN FRNVTEPLLV
MGFIPFNLIG GFWLLYWLDF NLSVAVGVGF IALAGIGAET AVLKLTFIDQ ELAQRRQAKL
KKRQEGENTP PSSKVLRLSS KEIMSAAYAG TMGRVRPVFM ADFSTIAGLL PIMWSSGTGA
ETMQRIAAPM VGGLVSVMIL NLLVLPVFYG MILQARERFR GQFKDGL
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