Gene Noc_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1355 
Symbol 
ID3706119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1500682 
End bp1502007 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content56% 
IMG OID637737850 
ProductSignal transduction histidine kinase 
Protein accessionYP_343379 
Protein GI77164854 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCTA TCGGCCGCCA ATTAGGCGTT AGTTTATTTA TCAGTTTGCT GGTGCCGGGT 
GTGCTGGCGG GACAAACTGC TATCTGGTGG CTGGATCAGC GCCAACGCGC CACCCTCGCC
GCTAGCCTGC GAGAAGAAAC CGTCAGCGTG CTGGCGGCAT TAGCCCGGGG GGGCAACGGC
CTGCGCCTAG ACCGCCAAGC CCTTGATCAA GTCTACCAGC GGCCCTTATC TGGTCGCTAT
TTTCTGATTA TTACCCCACA AGCGCGTTGG CGCTCCCGCT CCTTATGGGA TACTCAGTTT
GAGGAACCAG AGCAGGAGGG GCTTAGTGCT ACCTTGGTAG ATGGTCCCCA GGATCAAAAA
CTATTGCGCT ATCGCGCCCA TTATCAAATG GCGAGTCAGC CCGTTATTGT GGTGGTAGCC
CAGGATTATG CGCCGCAATT GCAGGATTTC AGCCGCCTTA AAACAGGCGC TCTGGTAGCT
TGGATAGCGC TCCTCGCGGT ACTGGCGGCC GTTCAGCAGG GACTCATCCG GCGCGGGCTT
CGCCCGCTTC TCCAAGTGCG CCAGCAATTG CAACAATTCC GTAAAGGCCA GCGCGCTACG
CTGGATAAAA ACGTGGCGCG CGAACTTAAA CCCCTGGTAG AAGAAGTGAA CCGACTCCAG
GGCGATATTG AACGGCAACT ACGCCGCTCT CGCCATGCCC TGGGAGATCT AAGCCATGGG
TTGAAAACCC CACTGGCAGT CATGAAAAAT CAGTCCCGTA CACAATTGCT TGCTCTTTCT
CCTGTTCTTG CAGGCAGCTT CAATGAGCAA CTCTCGCAAA TGGAAGCTGG CATCAAGCGA
GCCTTGGGGC GGGCCCGTAT TGCTGCCAGC ACAACCCCCA CCAACCGTTT TACACCTGTT
GAAGATGTCC CCCTATTGCT GCGTACTCTG CAACGGGCAC ATGATCGTGA TCTAAATCTG
GCGATCGAGG GGGTGTTGCC GCCAGCATTG CCCCTGGAAC GGGAGGATAT GCTAGAAATT
CTCGGCAATC TGCTGGACAA TGCCTGTAAA TGGACCCATC GCACCGTTGC CCTATCGTTG
CAACGACAAT CTACCGCGCT ACTTATTACC GTGGTGGATG ATGGTCCGGG GATTGCACCG
TCACAGCGGC AGGCAGTGTT GGCGCGGGGT CAACGTCTGG ATCAGCAAGT ACCTGGCCAA
GGGCTAGGAC TAGGGATTGT CAGTGACATG GTGGACGCCT ATGGCGGAGA GCTAACCTTG
GATGAAAATC CTGGAGGTGG ATTGTTAGTA CGGGTACGTT TGCCGCTGGC TGATTTGGGT
GAGTAG
 
Protein sequence
MSSIGRQLGV SLFISLLVPG VLAGQTAIWW LDQRQRATLA ASLREETVSV LAALARGGNG 
LRLDRQALDQ VYQRPLSGRY FLIITPQARW RSRSLWDTQF EEPEQEGLSA TLVDGPQDQK
LLRYRAHYQM ASQPVIVVVA QDYAPQLQDF SRLKTGALVA WIALLAVLAA VQQGLIRRGL
RPLLQVRQQL QQFRKGQRAT LDKNVARELK PLVEEVNRLQ GDIERQLRRS RHALGDLSHG
LKTPLAVMKN QSRTQLLALS PVLAGSFNEQ LSQMEAGIKR ALGRARIAAS TTPTNRFTPV
EDVPLLLRTL QRAHDRDLNL AIEGVLPPAL PLEREDMLEI LGNLLDNACK WTHRTVALSL
QRQSTALLIT VVDDGPGIAP SQRQAVLARG QRLDQQVPGQ GLGLGIVSDM VDAYGGELTL
DENPGGGLLV RVRLPLADLG E