| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1339 |
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| Symbol | |
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| ID | 3706142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1485368 |
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| End bp | 1486876 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637737835 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_343364 |
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| Protein GI | 77164839 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTA AAAGTGTATT CGCTGGGGTT AGCGTGATTT TGGTAGGGCT TGTTCTGGCC
TGGCTTATCC TCCATCAGGA AGAAGAGTCA CCTAATGGGC CTGCTGAAGG GGAAGCCCAT
GCCGGCCATG AAGAAGACGG AAAGGCTGAG GAACGCCACC GGCGGCACTT GATCCAAAAT
GGATTCGAGC TTGAAGTTGG GCTTGAAGAG GGGCAGGAAA GTTCCCCCCA TTTTCGGGTT
TTTGCCTATG AACAGGAACA GCTGATTAAT CCAAAGTCCA CGCAACTTGC TTTCCAACTC
CAGCGGCCGG GAGAGGCCCC AGAGTTTATA GGTTTTCAGG CTGACGGAGA ATCTCTACGT
AGTACCCAGC CCATTGCTGA ACCCCATATA TTTAGGGTTC GAGTGGCAGC CGAGTATCAA
GGCAAAACCT ACCAGTGGAA ATACTGGCAG GTGGAAGGGG GAATCGAATT ACAACCGGGC
GCTATTGCAG AGGCGGGGAT TGGGATTAAG GTGGCTGGTC CCGCGCCCAT TAAGACTACC
GTGGCCTTCC CCGGCGAAAT TCAATACAAC CCCCGCCAAG TGGCCCATGT GGTGCCTCGG
GTGGAGGGAG TCGTCACCGA GGTGCGCAAG TTCCTCGGCG ATAAGGTGAA AGAAGGCGAA
ATTCTAGCGG TGCTGAAAAG CCGGGAGCTG GCGGATCTGA AAAGTCAATA TTTGGTGACT
CTTAAACGTT TGGATTTGGC TCAAGAAATT TTTGAGCGGG AAGAACGCTT GTGGAAGGAA
AAAGTGTCCG CGGAACAGGA CTACCTGGTA GCCAAAAAGG AGCTGGCTGA AGCCCAGGTG
CTGATGGAGG CGGCGGCACA AAAACTCCGC GCTTTGGACT TTTCCAAGGT TGATTTGCAG
GCTATGGATT CGGAAACCGG AGCGCTTTTT AGCCGTTATG AGCTGGAAAC TCCTTTTAGT
GGGGAGGTGG TGGAAAAGCA TTTGGCTTTG GGGGAGGCCG TGACTGCCAA CGCAAAAATC
TATACGATTG CCGATCTGTC CACGGTTTGG GGCGAGATTA CTGTCTACAG CAAAGATTTA
AATCAGGTTC GGCGAGGCCA GGAAGTGACG GTGAAAGCGA CGGATATGGC GCTTTCCACA
GAGGGCAAGG TGTTTTATAT GGGACCGCTG GTGGGGCAGC AGACCCGTTC GGCCAAGGCC
TATGTGGAAA TTCCCAACCC CCAAGGACGC TGGCGTCCGG GATTATTCAT CACAGTGGAG
GTCGTGCAGG AGAAAATCAA GGTTCCGGTA GCAGTGACCG CCGAGGCGGT TCAAACTTAT
CAGAATCGCC CGGTAGTATT CGTTCAGCAC GGAAACCTTT TTGAGCCCCG GCCAGTGGTG
CTGGGAAGGG GATCGGGCCA GTGGGTAGAG GTGCGCCAGG GGCTCTCGGC AGGCGAGCAT
TACGTTGCTA GCAACAGCTT CGTGCTTAAA TCCGAGCTCG GTAAATCCAC TGCCACCCAT
CAGCATTAA
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| Protein sequence | MKSKSVFAGV SVILVGLVLA WLILHQEEES PNGPAEGEAH AGHEEDGKAE ERHRRHLIQN
GFELEVGLEE GQESSPHFRV FAYEQEQLIN PKSTQLAFQL QRPGEAPEFI GFQADGESLR
STQPIAEPHI FRVRVAAEYQ GKTYQWKYWQ VEGGIELQPG AIAEAGIGIK VAGPAPIKTT
VAFPGEIQYN PRQVAHVVPR VEGVVTEVRK FLGDKVKEGE ILAVLKSREL ADLKSQYLVT
LKRLDLAQEI FEREERLWKE KVSAEQDYLV AKKELAEAQV LMEAAAQKLR ALDFSKVDLQ
AMDSETGALF SRYELETPFS GEVVEKHLAL GEAVTANAKI YTIADLSTVW GEITVYSKDL
NQVRRGQEVT VKATDMALST EGKVFYMGPL VGQQTRSAKA YVEIPNPQGR WRPGLFITVE
VVQEKIKVPV AVTAEAVQTY QNRPVVFVQH GNLFEPRPVV LGRGSGQWVE VRQGLSAGEH
YVASNSFVLK SELGKSTATH QH
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