Gene Noc_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1223 
Symbol 
ID3706413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1337827 
End bp1338345 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content45% 
IMG OID637737725 
Producthypothetical protein 
Protein accessionYP_343254 
Protein GI77164729 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC CGAGATTAGT GTTGTTTTAT TTACTATTGG TAGCTATTCC CGCCGTACCA 
ACGGCTATGG CTGCCGAGAT TGGCCAACAG GCGCCTAACT GCTTATTGAA GCCCTTTGAG
AAAGAAGATC AGGTGTTTCT TCAGCAATGG CAAGGAAAGG TGGTTTATGT GGATTTTTGG
GCTTCTTGGT GCCCGCCTTG CCTTAAATCT TTTCCCTTTT TAAATGATCT GCATCAGCGT
TTTAGCGATC AAGGGCTACA TATTGTGGGC ATCAATGTGG ACGAGAAGTT AAGTGACGCC
CAAGACTTTT TAGCGAGAGT GCCCGCTCAC TTTGATGTTG TGGTTGATCC AGATCAGCAG
TGTGCCCGGT CATTTGATAT TCAAGCAATG CCTTCTTCTT TCTTGATTGA CCAAAAGGGC
GTGATTCGCC ATACCCACTT AGGATTTCGC TCGGGGGATA CGCAAGAGCT AGAGGCGTGG
ACGCAAAAAC TTTTACAAGA AAAAACGGCT AATCCTTAA
 
Protein sequence
MNKPRLVLFY LLLVAIPAVP TAMAAEIGQQ APNCLLKPFE KEDQVFLQQW QGKVVYVDFW 
ASWCPPCLKS FPFLNDLHQR FSDQGLHIVG INVDEKLSDA QDFLARVPAH FDVVVDPDQQ
CARSFDIQAM PSSFLIDQKG VIRHTHLGFR SGDTQELEAW TQKLLQEKTA NP