Gene Noc_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1221 
Symbol 
ID3706411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1336332 
End bp1337207 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content51% 
IMG OID637737723 
Producthypothetical protein 
Protein accessionYP_343252 
Protein GI77164727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTTCC GTGGATTTCT TCTTTTAGCA GCGCTCCTTT CTGGCCATGC ATGGGCCTAT 
GGGGAAGAGT CTTTTTCTGG CTCTGACCGC AAAAAAATTG AAGAGAATCC CGCGAATAAT
GGCGCTCTCC ATCTGGAGGT AAAGCAAGCG CCGCTGGCGC AAATTTTTAA GATCATTGAA
GATCAATCTG GCGTTCAGCT CCATATTTCT TCTCTCTCTC AAAGAAGGGT AACAGCCACT
TGCGCGGGCA CCGCCCTAGA AGTGTTAAAA TGCATCCTGG GCAAAGAAGC TAATCTTGTT
TATCGGTACG AAGATAAACC TTCTGACAAG AATTCAAAGC CTTTGCTTAG GGAAGTATGG
GTGCTCAATT CGGCTTCAGG CGAACCGCGC TCGTTGAGGC ATAACCCTGA TCAAGCTGTC
TGCGAAGCCA CGGAAAATTT TCCGGATGGA CAACATGGAC AACAGCCCCT AGTGGGAGAG
GAACAACAGG CGTTTTTCCA TTTGGAGCCG GAGGAGATGG AAAGGCTTAT GGACCTTTCC
CAGTCATCTG ATCCAAAGTG GCGGAAAGAA GCCTTGTCCC GCCTTGCCTT GGTAGCAGAG
GACGAGGACG ATGGCGGTGT CAGAAAAGTT TTAACGGAGG CATTGCAAGA CCCGAGTCCA
GCTGTTAGGG CGCAGGCCAT TTTCGGGCTA ACCCGGCGGG ATGATCCAGA GAGGGAATCG
GTGCTACGAG AAGCCTTGCA TGACAGCGAG GTGGAGGTGC GATTGATGGC GGTGAGCAAT
GCTGGAGAAG ATAGGGCTTT ACTTGAGATG GCGCTTCATG ATGAGGACAG GGTCGTGCGC
GATTTAGCTC GCATGAAGCT CGGGAAAATA GAATAG
 
Protein sequence
MIFRGFLLLA ALLSGHAWAY GEESFSGSDR KKIEENPANN GALHLEVKQA PLAQIFKIIE 
DQSGVQLHIS SLSQRRVTAT CAGTALEVLK CILGKEANLV YRYEDKPSDK NSKPLLREVW
VLNSASGEPR SLRHNPDQAV CEATENFPDG QHGQQPLVGE EQQAFFHLEP EEMERLMDLS
QSSDPKWRKE ALSRLALVAE DEDDGGVRKV LTEALQDPSP AVRAQAIFGL TRRDDPERES
VLREALHDSE VEVRLMAVSN AGEDRALLEM ALHDEDRVVR DLARMKLGKI E