| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1145 |
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| Symbol | |
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| ID | 3706909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1252540 |
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| End bp | 1254921 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637737648 |
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| Product | phenylalanyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_343179 |
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| Protein GI | 77164654 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.158362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA GTGAAGCCTG GTTACGAACA TGGGTTGATC CAGATATCAG TAGAGAAACC
CTGGTTGAAC GGCTCACGTT GGCCGGGTTA GAAGTAGAAA GTACCGAACC AGTAGCAGCC
CCTTTTAAGG GCGTTAAGGC TGCTAGGATA GTGGCTGTGG AGCCTCATCC CAGCGCCCCT
CGTCTACAGG TTTGCCAAGT AGATATCGGG AGTGGTTCCC TCTTGACGGT GGTATGCGGC
GCGCCTAATG CTCGGGCTGG GCTATGGGCG CCGCTTGCCA TCATTGGCGC CCAATTACCG
GCTGGTATAA GGATTGAGCT GGCGAAATTG CAAGGGGTAG AATCCTTTGG AATGCTTTGT
TCTGCGGCGG AACTGGGTCT TGCTGAGCAA TCAGCAGGAT TATTGGAGTT ACCTGAAGGA
GATTTTCCTG GCGTCGATCT CCATGAATTT TTGCAATTCG ATGATATCAG TATTGAGGTT
GATTTGACCC CCAACCGCAG CGATTGCCTA AGCGTTGCCG GGATTGCCCG GGAAGTGGGC
GTGCTCACCC AGTCTCCCGT AACGGAACCT GCCATCGAGC CTGTGACGGC CCAAATTGGA
GATATCTTCC CGGTCACTGT AACGGCGCCA GCGGCTTGTC CCCGCTATTT AGGGCGGGTT
TTAAGGGGCG TCAACCCCCA AACGCAGACG CCTTGGTGGC TCCGGGAGCG GCTTCGGCGC
AGCGGTATTC GGAGTTTAGG ACTGGTAGTC GATGTGACTA ATTATGTCAT GCTGGAGTTG
GGACAGCCAA TGCATGCCTT TGACCTGGAA CGGCTGAAAG GTGGCATTCA AGTGCGTTAT
GGGCAAGCCG ACGAGGCGCT TACTCTGTTG GATGGCACCC ATTTACGGTT GGATGAAGAA
ACTTTGATCA TTGCGGATCA GCAGCGAGCG CTTGCCTTGG CAGGGATTAT GGGAGGCGAA
GAATCAGGCA TTAATAACCA GACTCGGCAT CTATTTTTGG AGAGCGCTTT TTTCAACCCG
AGCGTTATTG CAGGTCGCGC CCGCTTTTAT GGTTTGCATA CGGATTCTTC CCACCGCTTC
GAGCGTGGAG TTGATCCCGA ATTACCGCGG CGGGCCATGG AACGGGCTAC AGCTTTGCTG
CTAGAGATTG CAGGGGGGCA GGCGGGACCG GTGATCGAGG TGGCAGACTC ATCCCAGCTT
CCTCCTCAGG CAACGATAAT TTTGCGGAAG GCCCGCATTC ACCGGGTTCT TGGAGTTGAG
ATTGCTGAGA GCCGTATTAC TGAACAATTG ACTCGGCTTG GTCTGAAAGT GGAAAGAATT
GAAGAGGGCT GGGAAGTGAA GGTGCCGAGT TTTCGCTTTG ATCTTGCCTT AGAGGTGGAC
CTTATTGAGG AATTAGGACG CTTATATGGT TATGATCGCC TTCCTAGCAC CCGGCCCGTG
GGGCAAATCC AGCCTGTGCT GAAAACAGAA GCGGGAGCTT TTATTGATCG TATTCGCCAG
GTGCTGGTAG ATCGGGACTA TCAGGAGGCG ATTACCTATA GTTTTGTGGA CCAAGAGCTA
CAGCAATTAT TGGACCCTGA GGGGAGCCCG CTGGTTTTGA ATAATCCGAT TTCCACAGAC
ATGGCAGTTA TGCGTACTAC TCTGTGGACG GGGTTAGTTC AGGCGCTGCA GTATAATTCA
TATCGCCAGC AAGAGCGGAT TCGTTTTTTT GAATATGGTC TTACATTTAA TGGCCAGTTG
GCTGATCTTA AACAGGAAAG AACGATCGCT GGTCTTATTT CAGGGGCTAG CTATCCGGAA
CAATGGGGAT TAGTGGGCCG ACCGGCCGAT TTCTTTGATC TCAAGGGAGA TGTGGAGGCG
ATATTATCAT TGGTGGGGGA GCAACGAAAT TGCTTTGAGT TCATGGCGGC CTCTCACCCT
GCTCTGCATC CAGGGCAGAG TGCTCAAATT CTTCGGGAAG GCCAAGCGGT GGGGTGGCTA
GGCGCTTTGC ATCCGTGGTT GGAGAGTAAA TTGGACTTGA GCAGCCGTGC CTACTTGTTT
TCCCTTCAGC TTGAGGCAGT CGAGCGGGGT AGCTTACCTG TTTTTCAGTC TTTATCTAAG
TTTCCAGCGA TTCGCCGGGA TATTGCCTTT TTAGTGAATG CTAATATTCC CGTGCAGGTA
GTTTTTGATT GCCTTAAGGG GTGCGAATCG GATATTCTTA AAGAATTCCA ACTATTTGAC
GTTTATACGG GGAAGGGTAT TGATCCTGAT AAAAAAAGCC TTGCTTTAAA ATTGATTCTG
CAGCACCCTT CCTACACGCT GACAGACGAT AGGGTTAATA TCTTTATAGA ACGAGTGATG
GCGCTGCTAG TAACCGAACT TGGCGCCATT ATTAGGGAGT GA
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| Protein sequence | MKFSEAWLRT WVDPDISRET LVERLTLAGL EVESTEPVAA PFKGVKAARI VAVEPHPSAP
RLQVCQVDIG SGSLLTVVCG APNARAGLWA PLAIIGAQLP AGIRIELAKL QGVESFGMLC
SAAELGLAEQ SAGLLELPEG DFPGVDLHEF LQFDDISIEV DLTPNRSDCL SVAGIAREVG
VLTQSPVTEP AIEPVTAQIG DIFPVTVTAP AACPRYLGRV LRGVNPQTQT PWWLRERLRR
SGIRSLGLVV DVTNYVMLEL GQPMHAFDLE RLKGGIQVRY GQADEALTLL DGTHLRLDEE
TLIIADQQRA LALAGIMGGE ESGINNQTRH LFLESAFFNP SVIAGRARFY GLHTDSSHRF
ERGVDPELPR RAMERATALL LEIAGGQAGP VIEVADSSQL PPQATIILRK ARIHRVLGVE
IAESRITEQL TRLGLKVERI EEGWEVKVPS FRFDLALEVD LIEELGRLYG YDRLPSTRPV
GQIQPVLKTE AGAFIDRIRQ VLVDRDYQEA ITYSFVDQEL QQLLDPEGSP LVLNNPISTD
MAVMRTTLWT GLVQALQYNS YRQQERIRFF EYGLTFNGQL ADLKQERTIA GLISGASYPE
QWGLVGRPAD FFDLKGDVEA ILSLVGEQRN CFEFMAASHP ALHPGQSAQI LREGQAVGWL
GALHPWLESK LDLSSRAYLF SLQLEAVERG SLPVFQSLSK FPAIRRDIAF LVNANIPVQV
VFDCLKGCES DILKEFQLFD VYTGKGIDPD KKSLALKLIL QHPSYTLTDD RVNIFIERVM
ALLVTELGAI IRE
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