| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0926 |
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| Symbol | |
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| ID | 3707316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1021251 |
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| End bp | 1023872 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637737434 |
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| Product | alanine--tRNA ligase |
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| Protein accession | YP_342968 |
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| Protein GI | 77164443 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.961534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCA GCGCCGAACT CCGAAAAATA TTTCTCGATT ATTTTCGCCA CCAGAGCCAT
GAGATTGTTC CCAGTGGCCC CTTAGTTCCT GCTAACGATC CGACCTTGCT GTTCACTAAT
GCAGGCATGG TCCAATTCAA AGAGGTTTTT CTGGGCAGGG AGGTCCGAGC TTATCATCGT
GCGGCAAGCG CCCAGCGTTG CGTCCGCGCC GGGGGCAAGC ATAACGATTT AGAAAATGTA
GGTTATACCG CCCGCCACCA TACCTTTTTT GAAATGCTGG GTAATTTCAG CTTTGGGGAT
TATTTTAAGC GCGAAGCTAT CGGTTATGCT TGGGAATTGT TGACTGAAGT GCTTAAGCTA
CCGCCTGAGC GGCTATGGGT GACAGTATTC AAGGAGGATG ATGAAGCTGC CAATATTTGG
TTGCAGGAAA TTGGGGTAAG TCCGGAACGT TTTTCCCGCT GTGGTGCCGA AGACAATTTC
TGGTCTATGG GGGAGACGGG GCCCTGCGGC CCGTGTTCTG AAATTTTTTA TGATCATGGA
CCGGAAATCG AGGGTGGTCC CCCTGGCAGC CCGGAGCAGG AGGGGGATAG GTACACTGAG
ATTTGGAATC TGGTTTTTAT GCAGTATGAC CGGGGTAAGG AAGGCCGGCT TTCTCCCTTG
CCTCGTCCTT CGGTAGACAC AGGGATGGGC TTGGAGCGGT TAGCGGCAGT AATGCAGGGA
GTGCATGATA ACTACAATAT CGATTTATTC CGCAACCTTA TCGCCGCCAT TACCGCCCTT
TCTGGTATTC AAAATCAAGA ACAAACTTCT TTGCGGGTAA TTGCCGATCA TATTCGATCT
TGTGTTTTTT TAATCGTAGA TGGTATTCAG CCTTCTAATG AAGGGCGGGG GTATGTTCTG
CGCCGCATTA TCCGGCGGGC TATTCGGCAT GGGCATAAAT TGGGCCTGCG TGATCCTTTT
TTCTACCGCC TAGTGGAGCC GCTGGTCCAG GAAATGGGAG AGGCTTATCC TGAATTGTTT
CGGCTTCAGA GCCAAGTAGA GCGGGTGCTG AAATTGGAAG AGGAGCGCTT TAATGAAACC
CTGGAGCAAG GACTCAAAAT TCTAGAGCAG GATATTATTG ATTTATCAGA TGCCGTAATT
CCCGGAGAAA CAATATTTCG GCTCTACGAT ACTTTTGGTT TCCCGGTGGA TTTGACTGCC
GACATTGCCC GGGAACGGAA ACTCACCCTG GATATGAAAG GCTTTGAGCA AGCCATGGCC
AAGCAGCGTA AACGGGCTCG GGCTGCCAGT CGCTTCAAAA TCGAATATGG ATCTGAGCTT
CAGATGGATT TGGAGACCGA ATTTACCGGC TATGAACAGC TCCGTGGCGA GGGCCAGATT
GCCGCTCTAT TCCGTCTGGC GGAGACTATG GAGACCGTGG AACAACTTAG CGCTGGCGAA
AGTGGCATGG TGGTGCTGGA CCGGACTCCA TTTTACGCGG AGGCGGGCGG GCAAGTAGGA
GATCGGGGAA CGCTACGTGG CTCCAATGGG TTATTCAACG TGACGGATAC CCACAAGCAG
GGCGCCGCCC ATGTTCATCT GGGCGAGGTT CGCTTAGGTC AGCTTCGAGT TGGTGATTCA
ATTCAATCCG AGGTGGATCG AAAATACCGA ACTCCTACCC GACTCAACCA TTCGGCAACT
CATCTTCTCC ATGCGGCCCT GCGGGAAGTG CTAGGGGAGG GGGTGATTCA GAAAGGCTCC
CTGGTGGCTT CCGACCGCCT GCGTTTTGAC TTCTCCCATC TTGAAGCCGT GCAGTCTGGA
CAATTGCGCC AAATCGAGCA TCTGGTAAAT GCTAAGATTA GGGCTAATTT GCCCGTAGAA
ACACAGATTA TGCCTTTGCA GCAAGCCCTA GATGCGGGTG TTATGGCATT GTTTGGCGAG
AAATACGGCG AGCAGGTTCG GGTTTTGCGC ATGGGAGACT TCTCGATGGA GCTGTGTGGT
GGTACCCATG TGGATCGGAC CGGCGATATT GGTCTTTTCA AGATCATTAA CGAAATGGGT
GTTGCCGCTG GAATCCGCCG TATTGAGGCA GTCACGGGAG AGGCAGCGCT ATCCTGGGTA
GAGGAGGGCG AGGTATGCTT GGAAGCCCTT ATGGGTCGGC TTAAGGCCTC CCGGAATTCA
GCGGTTGACA AGCTGGAGCA ACTGCAGCAA CAGACCCGCC AGCAGGAGAA GGAACTACAG
AGACTGAAAG CGAAATTAGC CACTACGGGA GGAGCGGATT TAAGCATTCA GGCGCAAGAA
ATTCGGGGCA TCAAAGTTTT GGCGGCCCGA ATTGATGGGG TTGATAGTAA AACCTTGCGC
GCCACGGTTG ATCAGCTCAA AGGCAAACTT ATTACTGCTG CCGTTGTATT GGGCACTGTA
GTGGAAGATA AAGTCGTTTT AATTGCTGGG GTGACTAACA ATGCCACTAG CCGGATTAAG
GCGGGAGATT TGGTCAACTT TGTTGCTGAG CAGGTAGGTG GCCGGGGTGG AGGTCGTCCG
GATATGGCCC AGGCGGGAGG CAGGAATCCG GATAAATTGG ATGCTGCCCT TGATTTAGTG
CCGAAGTGGG TAGAGGGACA GTTAACTTCC GGAGCGCAAT AA
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| Protein sequence | MKSSAELRKI FLDYFRHQSH EIVPSGPLVP ANDPTLLFTN AGMVQFKEVF LGREVRAYHR
AASAQRCVRA GGKHNDLENV GYTARHHTFF EMLGNFSFGD YFKREAIGYA WELLTEVLKL
PPERLWVTVF KEDDEAANIW LQEIGVSPER FSRCGAEDNF WSMGETGPCG PCSEIFYDHG
PEIEGGPPGS PEQEGDRYTE IWNLVFMQYD RGKEGRLSPL PRPSVDTGMG LERLAAVMQG
VHDNYNIDLF RNLIAAITAL SGIQNQEQTS LRVIADHIRS CVFLIVDGIQ PSNEGRGYVL
RRIIRRAIRH GHKLGLRDPF FYRLVEPLVQ EMGEAYPELF RLQSQVERVL KLEEERFNET
LEQGLKILEQ DIIDLSDAVI PGETIFRLYD TFGFPVDLTA DIARERKLTL DMKGFEQAMA
KQRKRARAAS RFKIEYGSEL QMDLETEFTG YEQLRGEGQI AALFRLAETM ETVEQLSAGE
SGMVVLDRTP FYAEAGGQVG DRGTLRGSNG LFNVTDTHKQ GAAHVHLGEV RLGQLRVGDS
IQSEVDRKYR TPTRLNHSAT HLLHAALREV LGEGVIQKGS LVASDRLRFD FSHLEAVQSG
QLRQIEHLVN AKIRANLPVE TQIMPLQQAL DAGVMALFGE KYGEQVRVLR MGDFSMELCG
GTHVDRTGDI GLFKIINEMG VAAGIRRIEA VTGEAALSWV EEGEVCLEAL MGRLKASRNS
AVDKLEQLQQ QTRQQEKELQ RLKAKLATTG GADLSIQAQE IRGIKVLAAR IDGVDSKTLR
ATVDQLKGKL ITAAVVLGTV VEDKVVLIAG VTNNATSRIK AGDLVNFVAE QVGGRGGGRP
DMAQAGGRNP DKLDAALDLV PKWVEGQLTS GAQ
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