| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0904 |
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| Symbol | |
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| ID | 3707289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 986298 |
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| End bp | 988547 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637737407 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_342946 |
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| Protein GI | 77164421 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.294253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATT CTCAGTATTC CCCGCAACCC ATGGCTGCGG AATTTTCAGA AGCAATGGAG
AAACTCGTAA ACGCTTGCTA TTCAGACCCG TTTAGAGTGC TAGGACCTCA CCCCTATCAA
AAAGGCATCG TTGTGCGGGC CTATCTCCCC CACGCGATCC AGGCATGGAT TGGAACTGAA
CCTCCTCAGG AGATGGCGCG ATCCTCGGCA ATAAATTTAT TCGAATGGCA TGGAAAGGCC
AAAGCTCTCC CCCTGCCCTA TCAGGTTTTA TGGGAGGACA AGATGGGATT TACCCACTAT
GAGTACGATC CCTACTGTTT CCCCCCGCAG CTTTCCGACT ACGATCTTCA TCTTTTTGGA
GAAGGAAAAC ACTGGCACGT CTACCGTATT CTCGGCTCCC ACCCCGTAAT CGTAGATGGA
ACCAGTGGCG TTTTATTTGC CACATGGGCG CCCGAGGCTG AGCGAGTAAG CATAGTGGGA
GATTTCAACC GCTGGGATGG CCGCTGTCAC CCCATGCAAC TTCGAGGTTT GACCGGAGTC
TGGGAGCTAT TCATCCCTGG TTTGAAGCCG GGGACTCTCT ATAAATATGA ACTCCGTAAC
CGCAACCGTG GGTCAATTCA TCTCAAATCC GATCCTTACG GGCAACGATT CGAACAGCGC
CCCCACACAG CCTCTATTGT AGCAGCAAAA ACCAACTACC TATGGCAAGA TAGGAAGTGG
ATGGAGCAAC GCAAACAGTT TGATTGGTTA CATCAGCCAA TTTCAGTCTA TGAGGTCCAC
CTAGGATCTT GGCAACGGGG GGAAAATGGT GCTTTCCTTA ACTATCGCCA ACTGGCCCGA
CAACTTGTGG ATTATGTCCT AAAAACAGGC TTTACCCACA TTGAGCTTCT GCCGGTTACC
GAGCACCCCT TGGACGCTTC CTGGGGCTAC CAAACAACCG GCTACTTCGC ACCCACGAGC
CGCTTTGGCT CACCTGATGA ATTCCGCTAC TTTGTAGATC ATTGTCACCT CCATGGCATT
GGCGTACTTA TGGATTGGGT GCCGGGACAT TTTCCTAAAG ACGCTCATGG GTTAGCCCAA
TTTGATGGCA GCGCCCTATA CGAGCACGAA GATCCCCGCT TAGGGGAACA TCGGGACTGG
GGAACGCTTA TTTTTAATTA TGGCCGCCAT GAAGTAAGAA ATTTTCTGCT TTCTTCTGCC
CTCTATTGGC TCGAAGAATT CCATATCGAC GGCCTACGGG TAGATGCGGT AGCCTCGATG
TTATATCTAG ATTATTCTCG CCAAGAAGGA GATTGGATAC CCAACAAATA TGGAGGCCGA
GAGAATCTTG AAGCCATCGA CTTTCTACGG GAACTGAATA AGGTGCTTCA CGCACAGCAT
CCAGGAGTTC TGGTCATTGC AGAAGAATCC ACCTCTTGGC CTATGGTTTC CCATCCAATC
TATGTTGGAG GTCTGGGCTT CTCCATGAAG TGGAATATGG GCTGGATGAA TGACACCCTC
TCTTACATGA GCAAAGATCC TATATACCGC CATTACCATC ACGACGCTCT TACCTTTGGG
CTACTGTATG CCTTTAACGA AAATTTCATG CTCCCTTTAT CCCATGACGA AGTGGTCCAC
GGTAAGCAAT CCCTACTCTA CAAAATGCCT GGAGATGAAT GGCAGCGATT TGCCAATCTC
CGCCTGCTCT ATACTATGAT GTTTACCTAT CCCGGTAAAA AACTGTTGTT CATGGGCTGC
GAATTCGGGC AGGGAGAAGA ATGGAACGAA TCCCGATCTC TAGATTGGTA TTTACTGAAC
TATCCTGTTC ACCAAGGTGT ACAAGCAGCT ATCAAGGATC TTAATCACCT CTACCGCAGC
CTCCCTGCCC TTAATTACTA TGATTTCGCC AAAGAAGGCT TTGAGTGGAT CGACTGCCAT
GACTCCGCCC AATCGGTGTT AAGCTACCTG CGCCTAAAGG ATGGAGATTT TGTGATCGTG
GTATTAAATT TTACCCCAGT ACCTCGTACT AATTACCGCC TCGGGGTTCC GAAATCCGGG
GTTTATTTAG AGTGCTTCAA CTCAGATTCT ACTTACTATG GTGGCAGTAA TATGGGCAAC
AGCCAAACCA TCCAGACCGA TAGCATTACC TGGATGGGAC GGCCCTATTC CATCAATATT
ACGGTGCCTC CGTTAGCGGG AATCGTGCTG CGATTAAAAA CACCGGCAAG CAAAATGCCC
GCTACTGCGC CTCTTAGCCC CGGAAAATAA
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| Protein sequence | MTNSQYSPQP MAAEFSEAME KLVNACYSDP FRVLGPHPYQ KGIVVRAYLP HAIQAWIGTE
PPQEMARSSA INLFEWHGKA KALPLPYQVL WEDKMGFTHY EYDPYCFPPQ LSDYDLHLFG
EGKHWHVYRI LGSHPVIVDG TSGVLFATWA PEAERVSIVG DFNRWDGRCH PMQLRGLTGV
WELFIPGLKP GTLYKYELRN RNRGSIHLKS DPYGQRFEQR PHTASIVAAK TNYLWQDRKW
MEQRKQFDWL HQPISVYEVH LGSWQRGENG AFLNYRQLAR QLVDYVLKTG FTHIELLPVT
EHPLDASWGY QTTGYFAPTS RFGSPDEFRY FVDHCHLHGI GVLMDWVPGH FPKDAHGLAQ
FDGSALYEHE DPRLGEHRDW GTLIFNYGRH EVRNFLLSSA LYWLEEFHID GLRVDAVASM
LYLDYSRQEG DWIPNKYGGR ENLEAIDFLR ELNKVLHAQH PGVLVIAEES TSWPMVSHPI
YVGGLGFSMK WNMGWMNDTL SYMSKDPIYR HYHHDALTFG LLYAFNENFM LPLSHDEVVH
GKQSLLYKMP GDEWQRFANL RLLYTMMFTY PGKKLLFMGC EFGQGEEWNE SRSLDWYLLN
YPVHQGVQAA IKDLNHLYRS LPALNYYDFA KEGFEWIDCH DSAQSVLSYL RLKDGDFVIV
VLNFTPVPRT NYRLGVPKSG VYLECFNSDS TYYGGSNMGN SQTIQTDSIT WMGRPYSINI
TVPPLAGIVL RLKTPASKMP ATAPLSPGK
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