| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0892 |
|---|
| Symbol | |
|---|
| ID | 3707219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 973287 |
|---|
| End bp | 975029 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637737395 |
|---|
| Product | hydroxylamine oxidase |
|---|
| Protein accession | YP_342934 |
|---|
| Protein GI | 77164409 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0707349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA GTATAATTAA AAGGCTCTTG CGAGCCATTG CTACGGTTTT TAGCGTAAGC
TTGTTATTCG TGGGCAATGC AAGTGCTGAT ATCCCGGATG AGCTTTATGA GGCTCTCGGG
GTGGATAAAT ATAAAGCTTC GCCCAAAGAG TTATATGAGG CAATAACCGA GCGTTATTAC
GATCCAGCCC AAGGGCATGG GGAGGGTAAG TATGCCGAAT ATTGGGAACC TCTTCCCTTT
AGCCAATATT TGGACCCTTA TACTTATTAT TCGCCGCCCG CTCAACCAGC TAAGGTGGCT
ACCCGCGAGG AGTGTATAGA ATGCCACGAA GATGAAACCC GGGGTTGGGT TCACGCCTGG
AGAAAGAGTG TCCATGCGAA TTTAGACGAA ATCCGTGATT TACCCAAGGA CGATTCCCGC
TATTATAAGA AAAAACTTAT AAAGGAGGTG GAAAAAAACC TTCGCTCAAT GGGTAAGCTG
GAAAAGAATG AGAATCTGAA AGAAGTTAGC TGTATCGATT GTCATGTTGG TGTTGGCGCT
GAAAAAGGCC ACCATAATCA GGATCTTCGC CTTCCCGATG CTGCCGTTTG CGGAATCTGC
CACCTACAAC AGTTTGCCGA ACGGGAATCG GAACGCGATA CTCTTACTTG GCCAGATACG
GATGTAAAAG GTAACAAAAT CGATCCAGTT TGGCCTCCAG GACGCCCCTC CCACGCCCTT
GATTATCAAG CTAATGTAGA TCTTGCCACA TGGGCGGCAA TGGAAGACCG GGAAGTTGCG
GATGGTTGCA CCATGTGCCA TATCAATCAA AACCGCTGCG ACACTTGTCA TACTCGCCAT
CAGTTCTCAG CAGTAGAAGC CCGTAAGCCG GATGCCTGTG GTAATTGCCA TAATGGGGCG
GATCACAACG AGTATGAAAA CTACTTGATG TCTAAGCACG GTACCACCTA CCTGATGCTA
GGGGATACCT GGGATTGGGA AGTGCCGCTT AAGGATGCTA TTGCGGAAAA TGGGCAAACT
GCGCCGACCT GTGCTTTCTG CCATATGGAG TACAAAGGCA GATTTGGCCA CAACGTGGTG
CGTAAGGTAC GGTGGGCCTT TAATCCCCAA GAGAAAATCG CCAATAACCT TGAGCATGAA
TGGTATGAGT ACCGCAACGA GGCGTGGATA GAAACTTGTA CTAATTGCCA TTCCGCCACC
TTTGCCGAAT CTTACCTTGA GTTTGTAGAC AATGGCATTA TCTCGGGCCT TAAAAAGCAG
TTAGAGGCGA AACAAATTGT TGAGGCCCTA TATGAGGATG GTTTGCTGCC CGGCCAGAAA
ACCAACCGTC CCGCGCCACC CAAGCCAGAG CACGATGCTC CAGGGGAGTT CTTCCAGCTG
TTTATTGCGA AGGGCAACAA CCCCACTGCA GTGGAGTTGC AATATGCAAA AATGTGGGAG
CAGGATCTGC TCAAGCATTA TAAGGCGCTG GCCCACGTAA ACCCAGGTTT TTGGACTTAC
ACAGAAGGCT GGGGGCCATT GCTGGAACGC TATACCAATA TCCAGGATGC GAATACCCAG
CTTAGAGCGT TTGCCAAATT GAAAGCCCAA GTTGCTACGC TAGAAGGAGA TGTAAAGGCT
GCGAAGCTAT TAGATCTGGA TAGCCAGGTA GAGCGAGCTG TTGTGGGCGG TCTAGGCGGC
GGTATGGTGC TTGCCGGTGT GGGTTTAGTA GCCTGGCGGC GCAAGCAAAA AACGGAAGGT
TAA
|
|---|
| Protein sequence | MSDSIIKRLL RAIATVFSVS LLFVGNASAD IPDELYEALG VDKYKASPKE LYEAITERYY
DPAQGHGEGK YAEYWEPLPF SQYLDPYTYY SPPAQPAKVA TREECIECHE DETRGWVHAW
RKSVHANLDE IRDLPKDDSR YYKKKLIKEV EKNLRSMGKL EKNENLKEVS CIDCHVGVGA
EKGHHNQDLR LPDAAVCGIC HLQQFAERES ERDTLTWPDT DVKGNKIDPV WPPGRPSHAL
DYQANVDLAT WAAMEDREVA DGCTMCHINQ NRCDTCHTRH QFSAVEARKP DACGNCHNGA
DHNEYENYLM SKHGTTYLML GDTWDWEVPL KDAIAENGQT APTCAFCHME YKGRFGHNVV
RKVRWAFNPQ EKIANNLEHE WYEYRNEAWI ETCTNCHSAT FAESYLEFVD NGIISGLKKQ
LEAKQIVEAL YEDGLLPGQK TNRPAPPKPE HDAPGEFFQL FIAKGNNPTA VELQYAKMWE
QDLLKHYKAL AHVNPGFWTY TEGWGPLLER YTNIQDANTQ LRAFAKLKAQ VATLEGDVKA
AKLLDLDSQV ERAVVGGLGG GMVLAGVGLV AWRRKQKTEG
|
|---|
| |