Gene Noc_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0833 
Symbol 
ID3707138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp911449 
End bp912219 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content47% 
IMG OID637737335 
Productflagellar motor protein PomA 
Protein accessionYP_342876 
Protein GI77164351 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.26307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTTAG CTACCTTGCT TGGCTTGATT GGCAGCTTTG GGGTTGTGGG GGGGGCTATT 
TTACTGGGCT CCAGCGTTCT GGTTTTTTTC AATCCGCCCT CCCTTTTAAT TGTATTAGGG
GGTACCACGG CTGTGGTGCT CATGAAGTTC TCCTTCAGCC AGTTTCTGGG ATCTTTTAAA
GTGGGTATGA AGGCTTTTTT GCATAAGCCT GAGAAGCCGG AAGAAATTAT TAAGCAGGCA
GTAGATATGG CCGGCACCGC CAGGAAGGAG GGGCTGCTGG CTTTAGAGGG CTGGGAGATT
AAAAATGAAT TCATGAAAAA GGGTGTCACT TTGTTGGTCG ATGGCCATGA TCCTGAGATA
GTGCGCCGGG TGTTGATGAC TGAGTTACGG CAAACCCTAA GCCGCCATGA ACTGGGGCAG
AAAATTTTTA AGGCGATTGG TGATGTGGCG CCAGCCATGG GGATGATTGG CACGCTGATT
GGCTTAGTGC AAATGCTCTC TTCCATGGAT GATCCAAAAA AAATTGGTCC GGCTATGGCG
GTTGCGCTGC TTACCACCCT TTATGGGGCA ATGATTGCCA ATATGGTGGC TCTTCCCTTT
GCCGATAAAC TTGCTCTTCG GAGCAATGAA GAACGGCTTA ATCGTTCCAT AATTATTGAA
AGCATACTTT CTATCCAACA AGGTCATAAT CCGCGGGTGT TGGAAGAATT ACTGCTGACT
TTTATGCCCG GTTCTAAGCG TAATAATAGC CATGGAGAAA AAGAAAGGTA A
 
Protein sequence
MDLATLLGLI GSFGVVGGAI LLGSSVLVFF NPPSLLIVLG GTTAVVLMKF SFSQFLGSFK 
VGMKAFLHKP EKPEEIIKQA VDMAGTARKE GLLALEGWEI KNEFMKKGVT LLVDGHDPEI
VRRVLMTELR QTLSRHELGQ KIFKAIGDVA PAMGMIGTLI GLVQMLSSMD DPKKIGPAMA
VALLTTLYGA MIANMVALPF ADKLALRSNE ERLNRSIIIE SILSIQQGHN PRVLEELLLT
FMPGSKRNNS HGEKER