Gene Noc_0730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0730 
Symbol 
ID3706996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp791580 
End bp792425 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content50% 
IMG OID637737233 
ProductABC-type polysaccharide/polyol phosphate export systems permease component-like 
Protein accessionYP_342774 
Protein GI77164249 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.596865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCGA CTTTAACTAA TATTATCGCC CGTCAGGATC TCCTTAAATC CTTGACCCTG 
AGCGAGTTGC AGTCTTCCAC GGCCCAAATG CGGCTCGGCT GGTTATGGTG GCTGCTGGAC
CCTTTGCTGT TGATGGGGGT ATATTGGGGA GTAATGGTGA TCATCCTTGG CCGGGGGAAT
ATTCGTTACG AACCCTACTG GATTTTCCTC TTCTGCGGCC TGATCGCCTG GAAGCATTTT
GCGGAGAGCG CCGCCAAGGC TACCAATGTG CTCAGCGCCA AGGATCATCT TATTAAGTCG
GTACCCTTTC CTACCATTAT TTTGCCGATC GCCGTTGTGT TTTCGAGTTT TGGTTTTTTT
TTATTCGGCA TGGGGGTGCT CCTGGTTTTT GCCCTAGGCG CCGCTTTATC CGGCGCGTTA
GTCCAGCATA GCGGTGATCT GCTTCCGCTG CTTCAACTCC CAGGCTTGAT GGCGTTGCAG
TTGCTCATTG TCACGGGGAT TGCCCTGCCC CTGGCGTGCG TAGGGGCCTT GGTCCGGGAT
CTTTCCCCCT TTATCAACCA CTTTCTTAGA ATGGCCTATT ACCTGTCGCC AGGGCTCTAT
GGTATCGACC TTATCCAGCG CCTTTTGACA GCCGAGTTCG GTTCCGAGTG GGGTAGTAAG
CTATTCAACC TCTACATGCT CAATCCCTTT GCTATCCTGA TTAGCGGTTA CCGGGACAGT
ATTTTTTATG GGGAGTTCAT GCCGCTTTAT TTTTGGCTCA TACTTTTTCT GGAAGCCGGG
ATTTTACTCT TTGTGGGATA TCGTATTTAT CTTTATTATG ACCGCCGTGT CATCAAGTTT
CTCTAG
 
Protein sequence
MLSTLTNIIA RQDLLKSLTL SELQSSTAQM RLGWLWWLLD PLLLMGVYWG VMVIILGRGN 
IRYEPYWIFL FCGLIAWKHF AESAAKATNV LSAKDHLIKS VPFPTIILPI AVVFSSFGFF
LFGMGVLLVF ALGAALSGAL VQHSGDLLPL LQLPGLMALQ LLIVTGIALP LACVGALVRD
LSPFINHFLR MAYYLSPGLY GIDLIQRLLT AEFGSEWGSK LFNLYMLNPF AILISGYRDS
IFYGEFMPLY FWLILFLEAG ILLFVGYRIY LYYDRRVIKF L