| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0709 |
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| Symbol | |
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| ID | 3706957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 768109 |
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| End bp | 769437 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637737212 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_342753 |
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| Protein GI | 77164228 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.120397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTTT GGGCGCTAGT CATGTTCGCA GTGCTATTTG CACTGCTGCT ATTGGGCTAT
CCGGTTGCCT TCACCCTGGG CGGTGTTGCG CTAGCTTTCG GCGCAATATT CCTGGATATG
GATTTCTTCC GGCTTTTGCC CCTACGTATC TGGGGCATCA TGACCAATTT CACTTTATTG
GCGGTGCCCT TGTTTGTATT TATGGGAGTC ATCCTAGAGA AATCAGGGTT AGCCGAAGAT
CTGCTGGAAA CCATGGGTTT ATTGTTTGGC CGGTTGCGGG GAGGATTAGG AATCTCCATC
GTTGTGGTAG GCGCCTTGTT GGCGGCAACG ACGGGGGTAG TGGGCGCTAC GGTAGTCACC
ATGGGGATTA TTGCTTTACC CTCCATGCTC AAACATGGCT ACGCCAAGGA GCTGGCGACA
GGGACTATTG CCTCTGCAGG TACATTAGGG CAGATCATCC CTCCTAGCAT TGTGCTGATT
CTATTAGGAG ACGTGATGGG GGTAGCGGTA GGCCAGTTAT TTATGGCGGC AGTCGTCCCT
GGAGTTCTGC TAATCCTGCT CTATATTTTC CATATCGCGA TAACCGCCTG GCGGCGACCA
GAGGCTGCGC CAGCTCTGAA TAGGGTGGTA TCCCAGGGTA ACCCCAGCTT AGGACGGCGG
GTAGCGAAAA GTCTTATTCC TCCACTAACC TTAGTAATCG CGGTATTAGG CTCCATTTTT
TTTGGCATTG CTTCCCCCAC CGAGTCGGCA GCTGTGGGCG CTCTCGGCGC AATCCTCCTG
GCGCTCTGGC ACCGGCGGCT AACACTGGCT AACTTGCACG CAGCTAGCGC CCAGACCGTA
CGCCTGACCA GTATGGTGTT TATTATCTTA ATTGGCGCCA CTGCTTTTGG CCTGGTTTTT
CGGGGAATGG GAGGTGACAC TCTGGTCTTG GAATTAATGA CGGGACTGCC GGGAGGAAGC
TGGACTTTCC TCGCCCTCAG CATGTTACTA ATTTTCTTGC TGGGATTTTT TCTGGATTTC
CTTGAAATTT GCTTTATTGT GGTCCCCATT CTTACCCCCG TGGCTATCCA CCTAGGGCTT
AACCCGCTCT GGTTTGCGGT ATTGATTGCG CTTAACTTGC AAACCTCTTT TCTCACGCCG
CCCTTTGGCT TTTCCCTATT TTATTTAAAG GCGGTAGCCC CCCCTGAAGT CCATATCACC
CACCTCTATC GCGGCATACT GCCCTTTGTG GCTATCCAGC TCATTACCCT GGCACTCCTG
TTGGTCTTTC CCGAAATAGG ACTCTGGCTG CCTACAACCA TGGATCGCTT GCAGGGGATG
GGTGGCTAG
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| Protein sequence | MEVWALVMFA VLFALLLLGY PVAFTLGGVA LAFGAIFLDM DFFRLLPLRI WGIMTNFTLL
AVPLFVFMGV ILEKSGLAED LLETMGLLFG RLRGGLGISI VVVGALLAAT TGVVGATVVT
MGIIALPSML KHGYAKELAT GTIASAGTLG QIIPPSIVLI LLGDVMGVAV GQLFMAAVVP
GVLLILLYIF HIAITAWRRP EAAPALNRVV SQGNPSLGRR VAKSLIPPLT LVIAVLGSIF
FGIASPTESA AVGALGAILL ALWHRRLTLA NLHAASAQTV RLTSMVFIIL IGATAFGLVF
RGMGGDTLVL ELMTGLPGGS WTFLALSMLL IFLLGFFLDF LEICFIVVPI LTPVAIHLGL
NPLWFAVLIA LNLQTSFLTP PFGFSLFYLK AVAPPEVHIT HLYRGILPFV AIQLITLALL
LVFPEIGLWL PTTMDRLQGM GG
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