Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0660 |
Symbol | |
ID | 3706892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 713769 |
End bp | 714674 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637737168 |
Product | hypothetical protein |
Protein accession | YP_342709 |
Protein GI | 77164184 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.125949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCAACG CCATCCCAAT GGATATCAAC CAAACGCAAA AAGAGCGGCT ATCGCACATT GATTTCAAAG CGCATTTTTT GGGGACTATT GGCCGAAATG ACCTCGTAAG CCGCTTCGGC ATCAAGGAGG CTGCGGCAAC CAGAGACATC ACTTTGTATA AGGATCTTGC CCCAGAAAAT CTGGAATATG ACACCAAGGC CAAAGTCTAT ATACGGGGCA CATCCTTTGA ACCGTTGTTC GATTACTCGC CCAGCCAGGC CATGGCAGCT CTCGCTCATG GATTTGGTGA CGATTTCGTG GGGACGCATA AGGCGTTGAT CGCATGCGAG GCCCCGGCGC AACTCAACCA CCCTGACTTA GAGACCTTGT CAGCACTGAC CCGCGCCATT CATCAGCATA AGGCGAGCAA AATTGTGTAT CGCTCCCTAA GCAGCGGACG CAGCACGCGC GAGATCGTAC CCTTCGTGTT GGTTGACAAT GGTTTGCGTT GGCATGTCCG TGGCTATGAC AGGAAGCAGT CAAGATTCGC GGATTTTGTT GTCACCCGCA TCTCAGATCC AGAAATTCTA GACGGGCCTG TTAAAGAGAA TGAAGGCCGT GAATCGGACA TCCAATGGAA TCGCGTCGTC GAGCTGGAAA TCGTCCCCCA TCCCAGCCTG AAACACCCGA AGACCATCGA AACAGATTAC GCCATGGAAA ACGGCGTACT GAAGGTCAAT GTTCGTGCTG CCGTCGCTGG TTACGTCCTC CGGCGCTGGA ATGTCGACTG CTCAGAAGAG CATAGCCTGG AAGGCCCGGA ATACCACCTC TGGCTGAAGA ACAGGCAAGC TCTGTATGGC GTTGAGAACC TGGTCATCGC TCCCGGCTAC AACCAGGACA ACCGCGTCGC CAGGGAGGGC TCATGA
|
Protein sequence | MPNAIPMDIN QTQKERLSHI DFKAHFLGTI GRNDLVSRFG IKEAAATRDI TLYKDLAPEN LEYDTKAKVY IRGTSFEPLF DYSPSQAMAA LAHGFGDDFV GTHKALIACE APAQLNHPDL ETLSALTRAI HQHKASKIVY RSLSSGRSTR EIVPFVLVDN GLRWHVRGYD RKQSRFADFV VTRISDPEIL DGPVKENEGR ESDIQWNRVV ELEIVPHPSL KHPKTIETDY AMENGVLKVN VRAAVAGYVL RRWNVDCSEE HSLEGPEYHL WLKNRQALYG VENLVIAPGY NQDNRVAREG S
|
| |