Gene Noc_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0660 
Symbol 
ID3706892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp713769 
End bp714674 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content54% 
IMG OID637737168 
Producthypothetical protein 
Protein accessionYP_342709 
Protein GI77164184 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.125949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAACG CCATCCCAAT GGATATCAAC CAAACGCAAA AAGAGCGGCT ATCGCACATT 
GATTTCAAAG CGCATTTTTT GGGGACTATT GGCCGAAATG ACCTCGTAAG CCGCTTCGGC
ATCAAGGAGG CTGCGGCAAC CAGAGACATC ACTTTGTATA AGGATCTTGC CCCAGAAAAT
CTGGAATATG ACACCAAGGC CAAAGTCTAT ATACGGGGCA CATCCTTTGA ACCGTTGTTC
GATTACTCGC CCAGCCAGGC CATGGCAGCT CTCGCTCATG GATTTGGTGA CGATTTCGTG
GGGACGCATA AGGCGTTGAT CGCATGCGAG GCCCCGGCGC AACTCAACCA CCCTGACTTA
GAGACCTTGT CAGCACTGAC CCGCGCCATT CATCAGCATA AGGCGAGCAA AATTGTGTAT
CGCTCCCTAA GCAGCGGACG CAGCACGCGC GAGATCGTAC CCTTCGTGTT GGTTGACAAT
GGTTTGCGTT GGCATGTCCG TGGCTATGAC AGGAAGCAGT CAAGATTCGC GGATTTTGTT
GTCACCCGCA TCTCAGATCC AGAAATTCTA GACGGGCCTG TTAAAGAGAA TGAAGGCCGT
GAATCGGACA TCCAATGGAA TCGCGTCGTC GAGCTGGAAA TCGTCCCCCA TCCCAGCCTG
AAACACCCGA AGACCATCGA AACAGATTAC GCCATGGAAA ACGGCGTACT GAAGGTCAAT
GTTCGTGCTG CCGTCGCTGG TTACGTCCTC CGGCGCTGGA ATGTCGACTG CTCAGAAGAG
CATAGCCTGG AAGGCCCGGA ATACCACCTC TGGCTGAAGA ACAGGCAAGC TCTGTATGGC
GTTGAGAACC TGGTCATCGC TCCCGGCTAC AACCAGGACA ACCGCGTCGC CAGGGAGGGC
TCATGA
 
Protein sequence
MPNAIPMDIN QTQKERLSHI DFKAHFLGTI GRNDLVSRFG IKEAAATRDI TLYKDLAPEN 
LEYDTKAKVY IRGTSFEPLF DYSPSQAMAA LAHGFGDDFV GTHKALIACE APAQLNHPDL
ETLSALTRAI HQHKASKIVY RSLSSGRSTR EIVPFVLVDN GLRWHVRGYD RKQSRFADFV
VTRISDPEIL DGPVKENEGR ESDIQWNRVV ELEIVPHPSL KHPKTIETDY AMENGVLKVN
VRAAVAGYVL RRWNVDCSEE HSLEGPEYHL WLKNRQALYG VENLVIAPGY NQDNRVAREG
S