Gene Noc_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0625 
Symbol 
ID3706857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp672892 
End bp673407 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content53% 
IMG OID637737133 
ProductDNA repair protein RadC 
Protein accessionYP_342674 
Protein GI77164149 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCCA AATCTTCACC TACCCAGGTG ATTCCTAAAA ACCGTTTTGC ACGTGTTCGC 
ATGGCGTCGC TAAACGATCC TGAAAAACAA TCCCTGCTGG AGCTGGCGTT TGCGGTATTA
CACGATCTGC ACCAGCCGGG CGTCGAGCTG CCGAGCCCCA ACCATACCCG TGACTTTTTA
CGGATGTTGT TGGCGGAGCG CAAAGCGGAA GTCTTTGGTT GTTTGTATCT GGATAACCGA
CATCGAGTGA TTGAAACGGT CGAGTTGTTT CAGGGAACCA TTGATGGTGC TTCGGTGTAT
CCCCGTGTGG TGGTGCAACA GGCACTTTCC GTTAACGCTG CAGCAGTGAT GTTTTTTCAT
AATCACCCGA GTGGTGTTGC CGAGCCCAGT AACGCGGACG AAGCGATTAC GCGGCGGCTG
AAAGAGGCGC TGGCACTCGT CGATATTCGT GTGCTGGACC ATTTTGTGGT CACTGCTGGC
GAGTCAATTT CGTTTGCCGA ACGCGGACTG CTCTAA
 
Protein sequence
MASKSSPTQV IPKNRFARVR MASLNDPEKQ SLLELAFAVL HDLHQPGVEL PSPNHTRDFL 
RMLLAERKAE VFGCLYLDNR HRVIETVELF QGTIDGASVY PRVVVQQALS VNAAAVMFFH
NHPSGVAEPS NADEAITRRL KEALALVDIR VLDHFVVTAG ESISFAERGL L