Gene Noc_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0563 
Symbol 
ID3706775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp610107 
End bp611528 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content52% 
IMG OID637737072 
Producthypothetical protein 
Protein accessionYP_342613 
Protein GI77164088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAGAC CTGACTACTT GTCATCCGGC GAGCTCGGTC GCCTGATCCC TGTAGCGACA 
AAGCCCGAGC TCAGAAATAC CTGCGTCACC TCAGCCATGC TCATGGCTGT TGAAGAATTC
GCAGAGGCGC TTTTAGGGGC TTTGGGTGCC CCAACCGGCA AACGCGCCAA AACTCACGTT
TGGCTTGAAC CGGTGTTTAA ATCCTCCAAA AACGACAACA AAGATCGTCC GGATGCCCTG
ATTATCGTAA ATAACGGTCG GCGGGAATGG CGAGCGTTAA TGGAGGCGAA GGCCAAGGGT
GCTGATCTGG ATGCCGACCA AATTGAGTGC TACTTGGACA TCGCCAAAGT CCAAGGTGTG
GATGCCGTTG TGACCATTTC CAACCAGTTT GTTGCAACGC CCACTCAATC GCCCTGCGAC
ATCAACCGGC AGAAGTTGAA AAAGGTGGCT CTGTTTCACT GGTCGTGGTC TTTCCTTCAG
ACAGAAGCAA AAATTCAGCT TTCAAAGAGC GCGGTTTCTG ATCCAGATCA GGCTTACATG
CTCGAGGAGT ACGTCCGCTA CCTCGAACAC GATTCATCTG GTGTCAGTGA ATTCGAGCAA
ATGGGCAAGG AATGGGTCGA AGCTTGCAAG CTCTATTTCG CTAAATCCAA ACTCGACAAA
AAATCCCCGA TGGGGGCTGC TGTCGTAAGC GACTGGGACG AGCTGATGCG TTGTACCGCT
CTCCTGATGA GTCGAAATTT GGAAACAAAC GTGACGACGG TGCTAAGCGC GAAGGAGAGG
AAAGATCCGA ATGGCCGTTC GGAGTCCATG CAAAGTTCGT TTGTTTCTTC GGGGGAACTT
AAAAGCCGAT TGGAAATTCC CGATGCGGCT TCGCCAATTT CTGTTGAAGC GGACCTGACC
CGACGTTCTG TTACGGTTTC TATGACCGTA GATGCGCCAA GGGACAAGAA AAGGGCTCCT
GCAACGGTTA CATGGCTGCT GCGCCAACTC GTCAAAACTG AGGATGGCAG CATTATGTTG
GTTGCCAAAT GGCCAGGCCG CACGCAGGAC ACTTGTGCAG AACTCGTAAA AGTTAGAGAA
GACGTCGATG CTTTGGTGGG GGATAGAAAA GGTCAACTCC CTCGCACTTT TGAAATACGG
GCAGTATCGG ACCTCGGTGG AAAATTCACG CAACGGCGTA ATTTCGTGCC GGAATTGGTG
TCGTGCGTCA CGCGATTTTA TGAAGCCGTC GGGCAGTATG TTGTTCCGTG GCAGGCACCT
CCCCCCAAGC CCAAGAAGCC GGTACAAGTA GAAGAATCCT CTGAAGAAAG TACAGGCCCA
GAGGCTGGAG AAATCAGTGC CCAACAAATC GCTCCAGGTG CGTTTGAGGC GTCGGCTATT
TTTGCATGCG CAAAAATAGC CGACGCCTCA AACGTCACCT GA
 
Protein sequence
MKRPDYLSSG ELGRLIPVAT KPELRNTCVT SAMLMAVEEF AEALLGALGA PTGKRAKTHV 
WLEPVFKSSK NDNKDRPDAL IIVNNGRREW RALMEAKAKG ADLDADQIEC YLDIAKVQGV
DAVVTISNQF VATPTQSPCD INRQKLKKVA LFHWSWSFLQ TEAKIQLSKS AVSDPDQAYM
LEEYVRYLEH DSSGVSEFEQ MGKEWVEACK LYFAKSKLDK KSPMGAAVVS DWDELMRCTA
LLMSRNLETN VTTVLSAKER KDPNGRSESM QSSFVSSGEL KSRLEIPDAA SPISVEADLT
RRSVTVSMTV DAPRDKKRAP ATVTWLLRQL VKTEDGSIML VAKWPGRTQD TCAELVKVRE
DVDALVGDRK GQLPRTFEIR AVSDLGGKFT QRRNFVPELV SCVTRFYEAV GQYVVPWQAP
PPKPKKPVQV EESSEESTGP EAGEISAQQI APGAFEASAI FACAKIADAS NVT