Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0563 |
Symbol | |
ID | 3706775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 610107 |
End bp | 611528 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637737072 |
Product | hypothetical protein |
Protein accession | YP_342613 |
Protein GI | 77164088 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAGAC CTGACTACTT GTCATCCGGC GAGCTCGGTC GCCTGATCCC TGTAGCGACA AAGCCCGAGC TCAGAAATAC CTGCGTCACC TCAGCCATGC TCATGGCTGT TGAAGAATTC GCAGAGGCGC TTTTAGGGGC TTTGGGTGCC CCAACCGGCA AACGCGCCAA AACTCACGTT TGGCTTGAAC CGGTGTTTAA ATCCTCCAAA AACGACAACA AAGATCGTCC GGATGCCCTG ATTATCGTAA ATAACGGTCG GCGGGAATGG CGAGCGTTAA TGGAGGCGAA GGCCAAGGGT GCTGATCTGG ATGCCGACCA AATTGAGTGC TACTTGGACA TCGCCAAAGT CCAAGGTGTG GATGCCGTTG TGACCATTTC CAACCAGTTT GTTGCAACGC CCACTCAATC GCCCTGCGAC ATCAACCGGC AGAAGTTGAA AAAGGTGGCT CTGTTTCACT GGTCGTGGTC TTTCCTTCAG ACAGAAGCAA AAATTCAGCT TTCAAAGAGC GCGGTTTCTG ATCCAGATCA GGCTTACATG CTCGAGGAGT ACGTCCGCTA CCTCGAACAC GATTCATCTG GTGTCAGTGA ATTCGAGCAA ATGGGCAAGG AATGGGTCGA AGCTTGCAAG CTCTATTTCG CTAAATCCAA ACTCGACAAA AAATCCCCGA TGGGGGCTGC TGTCGTAAGC GACTGGGACG AGCTGATGCG TTGTACCGCT CTCCTGATGA GTCGAAATTT GGAAACAAAC GTGACGACGG TGCTAAGCGC GAAGGAGAGG AAAGATCCGA ATGGCCGTTC GGAGTCCATG CAAAGTTCGT TTGTTTCTTC GGGGGAACTT AAAAGCCGAT TGGAAATTCC CGATGCGGCT TCGCCAATTT CTGTTGAAGC GGACCTGACC CGACGTTCTG TTACGGTTTC TATGACCGTA GATGCGCCAA GGGACAAGAA AAGGGCTCCT GCAACGGTTA CATGGCTGCT GCGCCAACTC GTCAAAACTG AGGATGGCAG CATTATGTTG GTTGCCAAAT GGCCAGGCCG CACGCAGGAC ACTTGTGCAG AACTCGTAAA AGTTAGAGAA GACGTCGATG CTTTGGTGGG GGATAGAAAA GGTCAACTCC CTCGCACTTT TGAAATACGG GCAGTATCGG ACCTCGGTGG AAAATTCACG CAACGGCGTA ATTTCGTGCC GGAATTGGTG TCGTGCGTCA CGCGATTTTA TGAAGCCGTC GGGCAGTATG TTGTTCCGTG GCAGGCACCT CCCCCCAAGC CCAAGAAGCC GGTACAAGTA GAAGAATCCT CTGAAGAAAG TACAGGCCCA GAGGCTGGAG AAATCAGTGC CCAACAAATC GCTCCAGGTG CGTTTGAGGC GTCGGCTATT TTTGCATGCG CAAAAATAGC CGACGCCTCA AACGTCACCT GA
|
Protein sequence | MKRPDYLSSG ELGRLIPVAT KPELRNTCVT SAMLMAVEEF AEALLGALGA PTGKRAKTHV WLEPVFKSSK NDNKDRPDAL IIVNNGRREW RALMEAKAKG ADLDADQIEC YLDIAKVQGV DAVVTISNQF VATPTQSPCD INRQKLKKVA LFHWSWSFLQ TEAKIQLSKS AVSDPDQAYM LEEYVRYLEH DSSGVSEFEQ MGKEWVEACK LYFAKSKLDK KSPMGAAVVS DWDELMRCTA LLMSRNLETN VTTVLSAKER KDPNGRSESM QSSFVSSGEL KSRLEIPDAA SPISVEADLT RRSVTVSMTV DAPRDKKRAP ATVTWLLRQL VKTEDGSIML VAKWPGRTQD TCAELVKVRE DVDALVGDRK GQLPRTFEIR AVSDLGGKFT QRRNFVPELV SCVTRFYEAV GQYVVPWQAP PPKPKKPVQV EESSEESTGP EAGEISAQQI APGAFEASAI FACAKIADAS NVT
|
| |