Gene Noc_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0559 
Symbol 
ID3706771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp604614 
End bp605543 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content55% 
IMG OID637737068 
Producthypothetical protein 
Protein accessionYP_342609 
Protein GI77164084 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3660] Predicted nucleoside-diphosphate-sugar epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.993865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGTT CGGCGGAGCC TTTTATTACC TGGTATCTGA CCGACGGTAA ACCCGGACAT 
GAAAATCAAA GTTCAGGGCT GTTGAACGCC CTGGCTCGCT ATGTACCCCT GCAGGCCCAT
GGAATACCGG TATCGTCTGG GCCAGGAACC ATTGGGTGGT GGGCCTTGAA GATTTTCCCG
CCCGCCAAGG ATCTCCCAAA TCCACATCTC ATCATCGGCG CGGGCCATGG GACCCATATA
CCGCTGCTTG CGGCGCGCCG TGCTCGTGGT GGGCGGACAG TGGTGTTAAT GCGCCCCAGC
TTGCCTTTTT CCTGGTATGA CCTATGTTTA ATTCCCGAGC ATGACGGGAT AGAAGCCGAA
GCCAATGTGG TGCTTACCCG GGGAGTGCTT AATAAGATAG CTTCAGAAGG TATTCATGAG
CCGAGTCGAG GATTAATTCT CCTAGGGGGA CCTTCGCGCC ATTATAATTG GGACCCTCAA
AGCATTTTAT GGCAGGTGCA AAGTCTGCTG AAACAAGAGA AGAAGACGTA TCAGTGGGTG
TTGAGCACCT CGCGGCGGAC GCCGCCATCC ATGCTCACGG CGCTCCGAAA TTTGCAGTTT
CCGAATTTGC AAGTGTTTGC CGGGGAAACG ACTCCGCCTG GCTGGGTAAC GGAACAATTG
TCCCTTGCGG GGCGGGTATG GGTGTCGGAG GACAGTGTTT CCATGGTGTA TGAGGCGCTT
ACCTGTGGAG CGGCGGTAGG TGTTCTTAAC GTGCCTTGCA AAGCTTGGGG ACGGGTAGTA
CGGGGCTTGG ATAGCCTCGC CGAGAAGGGA ATCGTGACGA CTTTTACCGC TTGGCGCCAA
GGCCAAAAGT TAGCGCCGCC CCGGCAGCAA TTTAATGAAG CTGATCGCTG TGCCCAGATT
CTTGTGGAAC GATGGTTCAG CGGCCCCTAA
 
Protein sequence
MQSSAEPFIT WYLTDGKPGH ENQSSGLLNA LARYVPLQAH GIPVSSGPGT IGWWALKIFP 
PAKDLPNPHL IIGAGHGTHI PLLAARRARG GRTVVLMRPS LPFSWYDLCL IPEHDGIEAE
ANVVLTRGVL NKIASEGIHE PSRGLILLGG PSRHYNWDPQ SILWQVQSLL KQEKKTYQWV
LSTSRRTPPS MLTALRNLQF PNLQVFAGET TPPGWVTEQL SLAGRVWVSE DSVSMVYEAL
TCGAAVGVLN VPCKAWGRVV RGLDSLAEKG IVTTFTAWRQ GQKLAPPRQQ FNEADRCAQI
LVERWFSGP