Gene Noc_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0535 
Symbol 
ID3706727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp573313 
End bp573801 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content48% 
IMG OID637737043 
Producthypothetical protein 
Protein accessionYP_342585 
Protein GI77164060 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTAA TCTATCAGCT TAGCCTAGGT CTGCTATTAG TTTTACCGGT CATCTCTTCC 
CATGCTGAGG AAAGCGTATG GGACAAGGCC CAGGTCTCCT ACTTCGGCCC CTCCAATATC
ACGGTCTATC GCAGTCCTAC CTGCGGCTGC TGTAAGAAAT GGGTCGAACA TCTGGAACAA
CACCACTTCA CTGTTAAAGA TATTACCACC GACAATATGC AAACCCTAAA GCAACAATAT
GGTGTTCCCC GGGAGCTGGC TTCCTGCCAT ACGGCCATTA TCGATGGTTA TGTCATTGAA
GGCCATGTTC CCGCCGACGA TATCAAACGC CTCCTCATGG AGAAATCTAA AATAACGGGC
CTGACGGTTC CCGCCATGCC AGTAGGCACG CCAGGCATGG AAATGGGGGC AAGAAAAGAT
CCTTTCCATG TTCTTCAATT TAATGAAGCA GGCCAGTCAA AACCGTTCAA CGCCTACCAA
AATTATTAA
 
Protein sequence
MRLIYQLSLG LLLVLPVISS HAEESVWDKA QVSYFGPSNI TVYRSPTCGC CKKWVEHLEQ 
HHFTVKDITT DNMQTLKQQY GVPRELASCH TAIIDGYVIE GHVPADDIKR LLMEKSKITG
LTVPAMPVGT PGMEMGARKD PFHVLQFNEA GQSKPFNAYQ NY