Gene Noc_0489 details

Gene Information

• Locus tag: Noc_0489
• ID: 3706660
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 524223
• End bp: 526220
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637736998
• Product: hypothetical protein
• Protein accession: YP_342542
• Protein GI: 77164017
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2982] Uncharacterized protein involved in outer membrane biogenesis

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000190696
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAAAA AATTATTTAT CCTATTCGCA ATTATCCTGA TATCCCTGCT GCTGCTGGTG 
ATACTGGCTG GAGTAATGAT TGATGAGAAT AGGGTTAAAA AATGGGTTTC TAACTATATT 
GAACAGGAGT ATGACAGAGA ATTTGAGATA ACTGGCGAGC TCAAGCTAAA TTTATTATCC 
TTGCAACCCA GCGTTACAGC AAAAGGAATA AAACTAGAAA ATGCAGAATG GGCGGATAAG 
CCTAATATGG CGACTATCGG TAAAGTTTTT TTCCAGTTTG AGTTTTTTCC GTTGATCTTA 
GGAAACATCA ACATCCTAGA TGTGGAAATT AGAGATGGCC GGATTTCCTT GCTTGAAAAA 
CAGAATAAAA CTAATTGGGA TATTTTTTTA CCAGAAGAGA AGAAGCCCCC AGGTTATTTT 
TCAGTAGAGA AAATCAGAAA TTTTAGGCTA AACGATTTCA CGGTGACTTA CCAAAGTAGG 
GTAAAAAAAG AAACCCATAC TCTGCTCGCA AAAAATATTC AGCTGCAAAA TTTTTATTCT 
ACTAAAAGGA AAGGTTCTTT TCAGGGAAAG GTTGATTCCA TTCCAATTGG TTTTCAACTT 
AACCAAAAGC CAATCAATGC AGAAAATGTG GACAAACTAC TCCTGTTGAC AGGACATATC 
GGTACGATAG AACTTTATTT TACCGGCGAT ATTTCCGATG ATTTTAATCT GATAAGGGGT 
AAATCCCGTG TAAAAGGATC CGGAGAAACA TTATTGCAGC TGGCCGAATT GGCTGGTTTA 
AAAATTAAGA ATTTTCGCTC TTATGATAGT TTTGCCACTA TTGATGCGAA TCTAGAGAAG 
ATGTTGATAA ATGTGAATCA GATGGATATT ACCTATGGTC AGAGTCAAAT GACAGGTACG 
TTGAAGATTG ATTCGAACGA GAAGCGAACG CTTGTTAGAG GCGATTTACT ATTTCCGGTG 
CTGTCTAGCC CTGATTTTAG ATCCCTAACT AAGAAAAGCG TAGCCGAGCT AGAAGAAGAA 
ACCACGGATA TTGATGTTAA GGCGCAAGAA AAACAAAGCG AGAAAAAAAA GCTCTTCGAT 
GATGATCCTC TCGAATCTTT TATCCCAGAA AAACTGGAAC TCTATCTGCA TATGAAAGTG 
GATAAATATG TTGGCGGTGA TTGGGATAAA CTTATTCAGG GGGGCAAGCT TAATATTGCG 
ATCAAGGAAA AACAGTTAGC GCTTCATCCA ATAAAAGTAA GGATGTTAGG AGGAGGGATC 
TCTCTGGAGG GATTGATCGA TCAATCAAAG AATAACTTAA CAGAAGCTGA TCTTAGGCTA 
AACGTTAATA ATTTTGAGCT CAAGCAAATC TCTGAAAGCT TAGCCGATCT TGATAATAAG 
CTTAATATTG ATGACATCAT TGGAGGAGAT TTTAATGCTG TGGTTAACTT GCATGCTAAT 
GGTGGTTCAC CGCAAGACAT GGCTTCAACT CTGAGTGGGG ATCTTAATTT CGTAGTAGAG 
GACGGCTATA TCGGTAGCTT GCTGGTAGAA GCCTTGCAGA TTGATGTGAC GGAAGCCTTT 
GTTTCTTGGC TGGCTGATAA TCCAAAGACA GAAATGAACT GCCTGGTGGG ATTATTTGAT 
ATTGATTCAG GACGCGTCGA AACCGAGTCC CTGCTCATCA ATACCGATGA TTCCAACGTA 
GTGGGTAATG GGGTTGTGAA TCTGGATAAG GAATTAATAA AGTACATGTT GGTTGCAAGG 
GCAAAAGATT TCTCTTTAAC GGGAGCGCCC ATTAAAATAG TTATGGAGGG GGATCTTTTA 
AATCCTATGC TTGATATTGG TGGTGAAGAT TCATTGCTTG AAGTGGCTGC TGAAGTGCTT 
GTGACGCCTA TTGCTGAAGG TTTTAAAAAT ATCTTTAGCG AAAATAGCGA AAGTGAAGAA 
TTAACGGGTT GTAAGAAATT TATGGACGAT ATTGCTCGTA TCCAGAAAAA AGCAGACACG 
GTGGAAAAAC ACCAGTAA 

 

Protein sequence

MLKKLFILFA IILISLLLLV ILAGVMIDEN RVKKWVSNYI EQEYDREFEI TGELKLNLLS 
LQPSVTAKGI KLENAEWADK PNMATIGKVF FQFEFFPLIL GNINILDVEI RDGRISLLEK 
QNKTNWDIFL PEEKKPPGYF SVEKIRNFRL NDFTVTYQSR VKKETHTLLA KNIQLQNFYS 
TKRKGSFQGK VDSIPIGFQL NQKPINAENV DKLLLLTGHI GTIELYFTGD ISDDFNLIRG 
KSRVKGSGET LLQLAELAGL KIKNFRSYDS FATIDANLEK MLINVNQMDI TYGQSQMTGT 
LKIDSNEKRT LVRGDLLFPV LSSPDFRSLT KKSVAELEEE TTDIDVKAQE KQSEKKKLFD 
DDPLESFIPE KLELYLHMKV DKYVGGDWDK LIQGGKLNIA IKEKQLALHP IKVRMLGGGI 
SLEGLIDQSK NNLTEADLRL NVNNFELKQI SESLADLDNK LNIDDIIGGD FNAVVNLHAN 
GGSPQDMAST LSGDLNFVVE DGYIGSLLVE ALQIDVTEAF VSWLADNPKT EMNCLVGLFD 
IDSGRVETES LLINTDDSNV VGNGVVNLDK ELIKYMLVAR AKDFSLTGAP IKIVMEGDLL 
NPMLDIGGED SLLEVAAEVL VTPIAEGFKN IFSENSESEE LTGCKKFMDD IARIQKKADT 
VEKHQ