| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0447 |
|---|
| Symbol | |
|---|
| ID | 3706618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 481904 |
|---|
| End bp | 482395 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637736957 |
|---|
| Product | type I restriction-modification system endonuclease |
|---|
| Protein accession | YP_342501 |
|---|
| Protein GI | 77163976 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00337855 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCTTTT CCTCGGCGCT GATCGACTAC GACTACATCA TGGGCCTGGC CGCCCGCTTC
AGTCAGGAGA AGCCCGGCAA GCAGACCATG AGCCGCGAGC AGTTGGTCAG CATGCTCGCC
GCCAGCAGTA ATCTCATGGA GGAACGCGAC CACATCATCG CTTACATCAA CAGCCTGCAA
GCGGGCGAAG GGTTGAGCGA GGAAGCCATC CGCGATGGCT ACCAAGCCTT TAAAGCGCAA
AAAGCCGACA GCGAACTGAG CAACATGGCC GCCCGGCACA ACTTGCAGGC TGGCACCCTC
AAAGCTTTCG TGGAGGCCAT TCTCGACCGC ATGATCTTCG ACGGCGAGCA GTTAAGCGAT
CTGTTCGCGC CCTTGGAGCT AGGCTGGAAA GCACGCAGCA AGGCGGAGCT GGCACTGATG
GAAGAGCTAG CGCCGTTTCT GAAAAAGCAG GCCCAAGGGC GGGAAATTTC AGGGTTGGCG
GCCTATGAGT AA
|
|---|
| Protein sequence | MLFSSALIDY DYIMGLAARF SQEKPGKQTM SREQLVSMLA ASSNLMEERD HIIAYINSLQ
AGEGLSEEAI RDGYQAFKAQ KADSELSNMA ARHNLQAGTL KAFVEAILDR MIFDGEQLSD
LFAPLELGWK ARSKAELALM EELAPFLKKQ AQGREISGLA AYE
|
|---|
| |