| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0442 |
|---|
| Symbol | |
|---|
| ID | 3706613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 478400 |
|---|
| End bp | 479554 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637736952 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_342496 |
|---|
| Protein GI | 77163971 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000469255 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATAC AATGCGCCTA CAAGTTCAGG TTTTACCCAA CGCCCACGCA AAAGCGGCAA
TTGGCCCTTG AGTTTGGCCA TGCCCGTTAT GTGTGGAATT GGGCCTTGGA AACCCGAACG
AAGGCGTATC AAGCGCAGGG GGAGTCGTCG AATACTATAA GTCTTAGTCG CCAATTGACG
GCACTGAAAA AGACGCAATG CCCCTGGTTG AGCGAAGCCA CCGCTAGTTG CCATACCCAA
AAGCTCAGGG ACCAAGATAC GGCCTTCAGG AACTTTTTCG CAGGTCGAGC GAAGTATCCC
CGCTTTAAGA AGCGCCACCA CACGCAATCG GTACGCTATC AGTTGGACCA ACGCCATGTG
GCGAAGAACT TCAACGCTGA AAGCAAGCTG TTGAAGCTGC CCAAGCTTGG CAGAGTTAAG
TTGAGATGGT CCCGTGGTAT CGAGGGCATC CCCAAGATGG TCACGGTCAG CCAAGCCCCG
GCGGGCCGTT ACTTCGTTAG CCTGACCTGC GAGGTGGAGA TTCTCCCCTT GCCTGTGCGA
AGGAACGCTA TCGGCGTGGA TGTGGGGGTT AAGGATGTGG TCATTACTTC CGAAGGCTGG
AAGTCGGGTG CGCCCAAATA CACCTATCAC TATGCCCGGC AATTGAAAAT GGCCCAGCGT
CGCCTGAGCA AAAAAAAGAA AGGCTCTCAG CGTCGCCGCC AGCAGCAACA GCGGGTAGCG
CGCATCCATG CCCGGATAAC CGATAGCCGC CGGGATTTTT TGCACCAACA ATCCTCCAAG
ATAGTCAACG AGAACCAAGT GATCTGCCTG GAGGATTTGA ATATCCAAGG GATGTTGAGA
AACCGACGCC TGAGTAAAGC CATAGCTGAT TGCGGGCTGT ATGAGCTCAG ACGGCAAATG
GAGTACAAGG CCGCCTGGTA TGGCCGGGAG GTGTTGATCG TGGACCGCTG GGCACCCACC
AGCAAGACGT GCTCGGCGTG TGGGGCTGTG CAAGAGTCCA TGCCGCTCAA AGTGCGCGCA
TGGGCTTGTG AATGTGGGGC CACCCACGAT AGGGACATCA ACGCAGCCAA AAATATTTTG
TTTTTCGGTA CGGCGGGGAG CGCCGGAACC TCTAAAGCGC GTGGAGCGGT AAAACCCCCA
AGGGCCGTGG CCTAG
|
|---|
| Protein sequence | MIIQCAYKFR FYPTPTQKRQ LALEFGHARY VWNWALETRT KAYQAQGESS NTISLSRQLT
ALKKTQCPWL SEATASCHTQ KLRDQDTAFR NFFAGRAKYP RFKKRHHTQS VRYQLDQRHV
AKNFNAESKL LKLPKLGRVK LRWSRGIEGI PKMVTVSQAP AGRYFVSLTC EVEILPLPVR
RNAIGVDVGV KDVVITSEGW KSGAPKYTYH YARQLKMAQR RLSKKKKGSQ RRRQQQQRVA
RIHARITDSR RDFLHQQSSK IVNENQVICL EDLNIQGMLR NRRLSKAIAD CGLYELRRQM
EYKAAWYGRE VLIVDRWAPT SKTCSACGAV QESMPLKVRA WACECGATHD RDINAAKNIL
FFGTAGSAGT SKARGAVKPP RAVA
|
|---|
| |