| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0427 |
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| Symbol | |
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| ID | 3706598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 467199 |
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| End bp | 469688 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637736937 |
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| Product | hypothetical protein |
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| Protein accession | YP_342481 |
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| Protein GI | 77163956 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.940862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT TAGCGTTCTC CCTTGCTACC CTGAAGCGGG ACTGGCGTTC TGGCGAAATC
CGGTTAATCG CCATGGCCCT TATCATCGCG GTGAGCGCCG TTACCACCGT TAATTTTTTC
GTTGAACGGC TGCGCCAGGC CATGGAAACG GAAGCCGGGA CGGTGCTAGG CGGGGATCTG
GTGGTGGAAT CCCGCGAGCC GTTGCCAGAA ACATTTACCA CTCAGGCTCA TACCCTGGGG
CTGAAAACCT CCCAGACTGT CTCCTTTCGG AGCATGGTGC CCGCGGGCGA TCGGCTACAG
CTCACGGAGA TCAAAGCCGT TGAGGAAAAT TATCCCCTGC GGGGCCGGTT AATGGTGGGG
GAAGATCCCT TTACGGAACC TGGGGCAACT AAGCAAACCC CGCCGCCTGG CACGGTATGG
ATGGATCCTC AGCTCACCCA GACCCTCCAA CGAACAGTAG GCGATGAAAT TGATCTAGGA
CAGTTACGCT TAGTAGTAGA CAAACTCTTG TTCCTGGAGC CGGATCGGGG AACTCAGGTT
TTCAATATCG CCCCCCGGCT GTTAATAAAT TTTAAGGATG TGGAGCGTAC CGGCTTATTG
CTGCCGGGAA GCCAGGCCCG CTACCGCCTG CTCCTGGCGG GTCCCCAACG GGAGATTCTA
TCCTATAAGC ACTGGGCCGG AATCCATGCG CCAGACCATG CCCGGGTGAT GGGGGTCCGG
GATGGACGGC CAGAGCTGCG GACCGCTCTC CAGCGGGCCG ATCAGTTCCT CACCCTGGCG
GCCCTGACAA GCGTTTTCCT GGCGGGTGTG GCCATTGCCA TTGCAGCGCG GCGATACGCG
GATCGGCACC AGGACAACTG CGCCATCATG CGCTGCCTGG GCGCAACCCA AAGATGGATT
ATCCAAACCT ATGCTATGAC CATGCTGTGG CTGGGGCTCA TCACCAGCCT TCTCGGTTGC
GTGGTGGCTT GGCTCGCCCA ATCGGTGCTG GCCTATCTCA TGATTCAACT CTTTCAAAGT
GAACTGCCCC CCGCCTCTCT CTTGCCCCTG CTGACCGGTA CCCTGACGGG CCTCATTGCC
CTGCTCGGCT TTGCCTTGCC GCCCCTGATG CGGCTCAAGG ATGTGTCACC TTCCCGGGTA
CTGTACCGGG ATAGGGAAAG TGCTCAGCAG GGTGGCTATA AGGTCTATTT AGGCGCGTTC
ATCGCCATTG CGGCGCTTAT TCCCTGGCGG TCGGGAGAAA TGACCTTAAC CCTCTATGTT
CTTGGTGGCA GCCTCTTGAC CGTCTCGGTG CTGGCGGCTT GCTCCTGGCT GCTCATCAAC
GGGCTAAAAC TGCTACGCCC ACGGGTGGGC GTAGCCTGGC GTTATGGCCT TGCCAGCCTG
GCGCGGCGGG CGGGAAGCAG CATCGTGCAG ACTATCGCCC TGGGACTGGG GATCATGGTG
ATGCTGCTAC TCACCGTGGT ACGCTCTGAT TTGCTGGCGA ACTGGCAAGC TAATCTCCCT
CCCGATGCCC CTAATCATTT TGTCATCAAT ATCCAGCCGG ACCAGGTCGA GGCCGTGCAA
ACTTTTTTTG CTGAGCAAGG CCAACCCGTG CCCCGGCTTT ACCCTAATAT CCACGGCCGC
TTAATCGCCA TCAATGGGAC TCCCATTGCG GAAAGGTCTT ACCGCGACCC GCGCGCCCAA
CGGCTTTCCC AGCGTGAATT TCACCTCACT TGGGCCGCTA AACTCCAAAC CGATAACCAC
ATCGTGGCCG GCGACTGGTG GTCCTCCCAA CCCTCACCCC CGCCTCAGTT TTCGGTAGAA
GTTGATCTGG CCGAAACCCT CGGAATCAAA CTGGGCGATT CCCTCACCTT TCAGGTAGCC
GGTAAAAAAA TTGAGGCCCC GGTCAGCAGC TTGCGGGCTA TTGAATGGAA CTCCTTTAAT
CCTAACTTTT TCGTCATGGC TTCACCAGGA TTGCTGGATG ATTCGCCTGG CACCTATTTG
ACCAGTTTTT ATTTGCCGGA AGGCAATAAC GCGCTTCCAA CCGCCTTGGT AAAGCAATTT
CCCAGCGTCA CTATTCTCGA TGTAAAAGCA TTGATGGCAC AAATCAGAAC TATCATTGAT
CGGGTTACCC TGGCGGTTGA ATTCATTTTT ATTTTCACCG TAGCCGCGGG GCTGGTGGTG
TTATTCGCCG CTATTCAATC CACCAATGAT GAACGACGCC ATGAAAGCGC CGTATTTCGA
ACCCTGGGAG CAAGCAGAGG CACTATCGTG CGCGGCCTAG CGGCGGAATT TCTCTCCCTG
GGAGCGGTAG CAGGAACTGT AGCCGCCATT GGCGCCCTTG CTATTGGCTA TGTACTGGCG
GAACGGGTAC TGCATACTGG TTTTCATTTC AACGGCTGGC TACTTATTCT CGGCTTGCTA
GCCGGCAGCC TGGGTGTGAG CCTTGCCGGC CTTTTAGGTA CCCGCTCGGT GCTGCAAGTA
CCACCCTCGG AAACATTGCG GCAAGTTTAA
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| Protein sequence | MKILAFSLAT LKRDWRSGEI RLIAMALIIA VSAVTTVNFF VERLRQAMET EAGTVLGGDL
VVESREPLPE TFTTQAHTLG LKTSQTVSFR SMVPAGDRLQ LTEIKAVEEN YPLRGRLMVG
EDPFTEPGAT KQTPPPGTVW MDPQLTQTLQ RTVGDEIDLG QLRLVVDKLL FLEPDRGTQV
FNIAPRLLIN FKDVERTGLL LPGSQARYRL LLAGPQREIL SYKHWAGIHA PDHARVMGVR
DGRPELRTAL QRADQFLTLA ALTSVFLAGV AIAIAARRYA DRHQDNCAIM RCLGATQRWI
IQTYAMTMLW LGLITSLLGC VVAWLAQSVL AYLMIQLFQS ELPPASLLPL LTGTLTGLIA
LLGFALPPLM RLKDVSPSRV LYRDRESAQQ GGYKVYLGAF IAIAALIPWR SGEMTLTLYV
LGGSLLTVSV LAACSWLLIN GLKLLRPRVG VAWRYGLASL ARRAGSSIVQ TIALGLGIMV
MLLLTVVRSD LLANWQANLP PDAPNHFVIN IQPDQVEAVQ TFFAEQGQPV PRLYPNIHGR
LIAINGTPIA ERSYRDPRAQ RLSQREFHLT WAAKLQTDNH IVAGDWWSSQ PSPPPQFSVE
VDLAETLGIK LGDSLTFQVA GKKIEAPVSS LRAIEWNSFN PNFFVMASPG LLDDSPGTYL
TSFYLPEGNN ALPTALVKQF PSVTILDVKA LMAQIRTIID RVTLAVEFIF IFTVAAGLVV
LFAAIQSTND ERRHESAVFR TLGASRGTIV RGLAAEFLSL GAVAGTVAAI GALAIGYVLA
ERVLHTGFHF NGWLLILGLL AGSLGVSLAG LLGTRSVLQV PPSETLRQV
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