Gene Noc_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0298 
Symbol 
ID3706469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp327094 
End bp328320 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content48% 
IMG OID637736813 
Productcytochrome b/b6-like 
Protein accessionYP_342357 
Protein GI77163832 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.349609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA CAATAAATCA AATTTTTACC TGGATTGATG CCCGCCTTCC CATTTCCCAG 
CCATGGAAAG AGCATTTATC GGAGTATTAC GCGCCAAAAA ATTTCAATGT TTGGTATTTT
TTTGGCTCTT TGGCCATGCT GGTGCTGGTT ATCCAGTTAG TTACCGGACT CTTTCTGACC
ATGCATTATA AGCCGGCGGC CGATCTGGCC TTCGGCTCCG TCGAATATAT TATGCGGGAT
GTGGAGTGGG GCTGGTTGAT CCGCTACATG CATTCTACCG GGGCCTCGGC ATTCTTCATT
TTGATTTATC TCCATATGTT TCGGGGAGTC ATTTACGGTT CCCACAAAAA ACCCCGGGAA
TTAGTGTGGA TTATTGGTGT GCTTATCTAC CTTACCCTGA TAGCAGAAGC TTTTATGGGT
TACTTACTAC CCTGGGGACA AATGTCTTAC TGGGGCGCCC AGGTCACCAT TTCCCTCTTC
GGGGCTTTTC CACTTATCGG TGAAGGCTTA TCCGAATGGA TCCGGGGCGA TTTTGTGGTC
TCTGACGCGA CCTTAAACCG CTTCTTCGCC TTCCATGTGT TTCTGATGCC TTTATTGCTG
CTGGCGTTGG TTGTCGCTCA TATTATCGCC TTGCACCAAA CAGGCTCTAA TAATCCGGAC
GGAGTAGAAA TCAAAGAGAA AAAGGACCCC AAAGGCGTCC CTCTGGACGG TATTCCCTTC
CACCCTTACT ACACGGTCAA GGATCTATGG GGGGTTGGGG TATTTCTGCT CCTGTTTGCC
TGGGTTGTTT TCTATGCTCC CGGTTTTGGC GGCTGGTTTC TAGAACATGA CAACTTCACG
CCCGCTAATC CACTTGCCAC CCCTGAGCAT ATCAGGCCTC TGTGGTACCT CACCCCTTTC
TATTCCATAT TGCGATCAGT CCCCGACAAA TTACTAGGCG TCCTTGCCAT GGATGCCGCC
ATCTTTCTAT GGTTTTTCCT GCCGTGGCTG GACCGCAGCC CGGTCAAGTC TATTCGTTAC
CGAGGATGGC TTTATAAGGC TGCCATCGGA ATCTTCGTCA TTAGCTTTCT GGGACTAGGC
TACCTGGGTA CCCAACCGGC CACACCGTTA ATGACCATGT TTGCCCGGGT ATTTTCAATA
CTTTATTTTG CTTTCTTTTT GCTAATGCCA ATCTATACCA AGATGGATAA AACCAAACCC
GTTCCGGAAA GGGTGACCTC AAAATGA
 
Protein sequence
MKNTINQIFT WIDARLPISQ PWKEHLSEYY APKNFNVWYF FGSLAMLVLV IQLVTGLFLT 
MHYKPAADLA FGSVEYIMRD VEWGWLIRYM HSTGASAFFI LIYLHMFRGV IYGSHKKPRE
LVWIIGVLIY LTLIAEAFMG YLLPWGQMSY WGAQVTISLF GAFPLIGEGL SEWIRGDFVV
SDATLNRFFA FHVFLMPLLL LALVVAHIIA LHQTGSNNPD GVEIKEKKDP KGVPLDGIPF
HPYYTVKDLW GVGVFLLLFA WVVFYAPGFG GWFLEHDNFT PANPLATPEH IRPLWYLTPF
YSILRSVPDK LLGVLAMDAA IFLWFFLPWL DRSPVKSIRY RGWLYKAAIG IFVISFLGLG
YLGTQPATPL MTMFARVFSI LYFAFFLLMP IYTKMDKTKP VPERVTSK