Gene Noc_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0271 
Symbol 
ID3706442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp299700 
End bp300365 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID637736787 
Productnicotinamidase 
Protein accessionYP_342331 
Protein GI77163806 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.728122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGAC CCCCTGTTAC CTTTAATAAG GCACGCGCCG TATTATTATT GGTAGATATT 
CAACCAGATT TTCTACCTGG AGGTGGGCTT CCTGTAGCAG ATGGCAGCCA AATCATCGAG 
CCAGTGCGAT TGCTGATGGA ATCCGATAAA TTTTGCCATT ATGTGGCGAC TCAGGATTGG 
CATCCACCCG GTCATGTCTC CTTTGCCAGC AGCCACCCAG GGGCTGAACC TATGGCTACC 
CTTGAAATCA ACGGTTACGC CCAGACCCTG TGGCCTGATC ACTGCATCCA GGGAACGTCA 
GGCGCTGAAC TTCATGGAGA TCTGCCCTGG GAAAAGGTGG CGGCCATCAT ACGTAAGGGA 
ACCGATCCAG AGAGCGATTC CTATAGCGGA TTTCATAATA ACTGGAATTC CGCAGGTGAG 
CGTCCTGCTA CCGGATTAGC GGGTTATTTG CGGGAGCGGG GTATAGAAGA ATTATTTATC 
TGCGGCCTTG CCCGTGACGT TTGCATAAAA TGGACCGCTG AAGACGGTGC TAATGCCGGC 
TTTAATGTTT ACGTGCTATG GGATCTCACC CGCCCCGTGG AACCTTCTTC CGATGACCAG 
GTACGCCGGG AGCTAATAGC CCATGACGTT AAAATTATTG ATTGGGAGCA GCTTGTTAGG 
TATTGA
 
Protein sequence
MERPPVTFNK ARAVLLLVDI QPDFLPGGGL PVADGSQIIE PVRLLMESDK FCHYVATQDW 
HPPGHVSFAS SHPGAEPMAT LEINGYAQTL WPDHCIQGTS GAELHGDLPW EKVAAIIRKG 
TDPESDSYSG FHNNWNSAGE RPATGLAGYL RERGIEELFI CGLARDVCIK WTAEDGANAG 
FNVYVLWDLT RPVEPSSDDQ VRRELIAHDV KIIDWEQLVR Y