Gene Noc_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0260 
Symbol 
ID3706334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp286194 
End bp287405 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content51% 
IMG OID637736776 
Producthypothetical protein 
Protein accessionYP_342320 
Protein GI77163795 
COG category[R] General function prediction only 
COG ID[COG2232] Predicted ATP-dependent carboligase related to biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAC TCCAACGAGC GCCTTCTAGT AAGCTCGGAA TTCGCTGTAA TCAAGGGGGG 
TGGAACCAGC TCCACCCTAT CCTCATTCTA GCCAATAGCG GGCGAGCGCT TGCTCAATCC
GCAGCTGCAA GCGGATATCG GGTAGTAGTT GCCGATAACT ACGGGGATAG AGAAACCCGC
CAAGCCGCGC TTGCCTGGAT ACGGATTTTT TCTGGTGCTA ATGTGGGACA TTGGCGCCAA
AAGATAGTGC GGTTTATTGA GGCGGAAAAA TATCCAGTAG GCCTAATCTT CGGCAGCGGA
TTTGAAAACC GTCCTGACAT CATGGAAGAA TTGAGCCGTA GGGGAATATT GCTAGGGAAT
ACGCCTCACT GTGTCCGCTT ACTCAAAGAT CCCCGCCGTT TTTTTCCATT GCTTGGGAAG
CTTACGATTC CAGCACCAGA AGTCCAGCTT CAACTCCCCG ATAATCCTCT AGGATGGCTA
TGCAAGGCTA TTGGCGGCGC GGGTGGTCAT CATATATTCC CGGCTACAAT ACCCAACATC
CGTCGGCAAC AGCTTTGGGT GCGCCAAGGG TGGACTACCG CTGCCCCTGT CCCTTACTAT
TATCAACGTA AACTGGAAGG ACAGCCGGGA TCAGTATTAT TTCTTGCTAA TGGCAAGGAA
GTACAAATCC TCGGCTATCA TTATCTATGG CTTGCCCCTA CTCCTGCCAT GCCTTACCGC
TATGGCGGAA TTGCTGCTCC CCTGAATTTG ACTCCATCTG CTGGCGCCCT TTTACGAAAC
TATCTACAAG CAATTGTGAC AGCCACAGGT CTGCGTGGTC TTAACGGTCT GGATTTTATC
CATGGATCGC AGGGGATTCA GGTTCTAGAA ATTAACCCTC GCCCCCCTGC TTCCCTGGAT
CTGTATCAAG ATCGTTTTAG CCCCTTTGAC GCCCATGTCA AAGCTTGCCT AGGTAGCTCT
CTTCCCATAC AGATAGCCCC CATAGCTGTT GCACGGGCCT TTTCCATCCT CTATTCTCCT
CATCCGTGGC GAATACCCCC TAATATAGTC TGGCCAGCTT TTTGCACTGA TCTCCCGGCT
GAAAATACCC TAATTAAGCG GGAAGAACCC CTTTGCTCCA TCCATGCCAT GGCAACCAGC
ACCGAAACCT GTCAGCAGTT GATTCGACGG CGTCAAAATC AAGTGCTGGA ATGGTTGACC
TCATCGTTCT AA
 
Protein sequence
MAKLQRAPSS KLGIRCNQGG WNQLHPILIL ANSGRALAQS AAASGYRVVV ADNYGDRETR 
QAALAWIRIF SGANVGHWRQ KIVRFIEAEK YPVGLIFGSG FENRPDIMEE LSRRGILLGN
TPHCVRLLKD PRRFFPLLGK LTIPAPEVQL QLPDNPLGWL CKAIGGAGGH HIFPATIPNI
RRQQLWVRQG WTTAAPVPYY YQRKLEGQPG SVLFLANGKE VQILGYHYLW LAPTPAMPYR
YGGIAAPLNL TPSAGALLRN YLQAIVTATG LRGLNGLDFI HGSQGIQVLE INPRPPASLD
LYQDRFSPFD AHVKACLGSS LPIQIAPIAV ARAFSILYSP HPWRIPPNIV WPAFCTDLPA
ENTLIKREEP LCSIHAMATS TETCQQLIRR RQNQVLEWLT SSF