Gene Noc_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0170 
Symbol 
ID3706203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp187731 
End bp188318 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content53% 
IMG OID637736687 
Producthypothetical protein 
Protein accessionYP_342233 
Protein GI77163708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.186082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGGCG GATGTACATT GTTTGGCGGC GGGGGGGATT CGCCAGGAGG TTATACCCTG 
GAAGTAGTGC GGGTGCTAGA GCAGCCCTCG CCCCAGGCCA GGGAACGAAT ACTAGAGGTG 
GTTCCCTTTC GGATTAGTCC TCGTTATCGC AGCCGGCTTT GGCTCTACCA GGAGGCAGGC 
TCTTGGCATC GGGTGGAGGA GGAACAGGCT TTCCTCATCC CTCCACAAGT TTTGGTGACC 
GAGCAGGCAA GCACCTATTT CAGACGTTCG GGGTTATTCG GCGCAGTGGT GGAAGGGGAG 
AGTCGATTAC AAGTAACCCA TCTTTTGGAA GGTGCAGTGA CTGCGCTGTA CGGTGATTTT 
AGCGATCCCA TGGCCCCACG GGCAGTGATG GAAATTCAAT TCTTTTTAAT TGATCCCCGG 
CTTGATCCTC CTAAGACTCT GCTGAAATCA GGCTTCCGAG TCGAAGCGGA AATTTTGGCG 
GCAACCCCCC AAGCACTTAT CCAAGGATGG AATAATGGCT TAGAAAGTAT ATTAGAGAAC 
TTCGAAAACG ACTTGCGACG GTTATTCGAT CATTCCTCAC GGGGATAG
 
Protein sequence
MLGGCTLFGG GGDSPGGYTL EVVRVLEQPS PQARERILEV VPFRISPRYR SRLWLYQEAG 
SWHRVEEEQA FLIPPQVLVT EQASTYFRRS GLFGAVVEGE SRLQVTHLLE GAVTALYGDF 
SDPMAPRAVM EIQFFLIDPR LDPPKTLLKS GFRVEAEILA ATPQALIQGW NNGLESILEN 
FENDLRRLFD HSSRG