Gene Noc_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0124 
Symbol 
ID3706156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp131648 
End bp132205 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content45% 
IMG OID637736640 
ProductCheW-like protein 
Protein accessionYP_342187 
Protein GI77163662 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.47462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTC CATTAGAAAT GACTACAAAC CAGCTATCTA TTTCAAATAT CAGGGCAGAG 
ACACATCCCC ATGACGATGA TGATAAAGCC GGTAGCCATG CACAATCCAG CAACCAAGTA
CCCAGCATTC TGATACCTTT GCAGGAGCAA GTCTTACTTT TACCCAGAAC CGCAATTGCC
GAAATTATCC CTTATCTCAA GCCTAAATCC CTGCCGAATG CCCCTCGCTG GCTATGCGGT
ACAGTACGCT GGCGGGAGCA GCTCCTCCTG CTGGTAAGTT TTGAAGCGCT TCAAAAAAAA
CCTGTTCCAG CACTTTCAAA CCATGCCCAC ATCGTCATAC TCAATACTGT AAGAAAGGAT
TCCAATCGGA AATTTTATGC TCTTATTATT CAAAACATTC CCCAGCTGAT TCTGGCCCAT
ACCAATAACC TCTCAGCTTC CCCCAAGGCT CCCAACAGTC CCTTGCTATA CTGTTACGCA
GAAATTAACC AGATTCCAGT ATTGATTCCC AATCTCGAGT ACCTGGAGAA AACGCTCCAA
AGGTGCCTTA CAGGATAA
 
Protein sequence
MTFPLEMTTN QLSISNIRAE THPHDDDDKA GSHAQSSNQV PSILIPLQEQ VLLLPRTAIA 
EIIPYLKPKS LPNAPRWLCG TVRWREQLLL LVSFEALQKK PVPALSNHAH IVILNTVRKD
SNRKFYALII QNIPQLILAH TNNLSASPKA PNSPLLYCYA EINQIPVLIP NLEYLEKTLQ
RCLTG