Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0098 |
Symbol | |
ID | 3705897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 98555 |
End bp | 99265 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637736614 |
Product | hypothetical protein |
Protein accession | YP_342161 |
Protein GI | 77163636 |
COG category | [S] Function unknown |
COG ID | [COG3330] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.888213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA CCCGCCTCCC GCTCCAGCGG AAAGCCCAGC TGCACCCATC CAAGGAAGAA AAGACGCCGT TATCTCAGCA AGAGCTGCTC CGGATCAGCC AAGAAACAAG AGATTGCTTT CTTCCACCAG CCTCCCCAGA TAAAACCCAG TTAGGGTTGA TGGTCGTAAA CCCCTATCGT GTTTACGCTT ATTGGTCAAT TCTGAACCAA GATCTTATCC GCGCCCATAA AAAACTCGGG ATAAAGAAAT CCGCTCAATG GGCGCTGCGG TTTTATGACT TTACTGCCGG GAAGCTTGCT ATTAGCTCCA GTTTTGAAGT GGCTATCCCG AGGAAAGCCC ATCATTGGTA TATAGATCTT TGGGCTGACA ATAAACATTA TATGGCAGAG CTTGGATTAG CGGATTCTGA AGACCAATTT GTTGCCTTGG CACGCTCTAA TATGATAGAA ACTCCCCGTG CTGGTTCTGC CGATCCTACC GCCCCGGTGA TTTTCACGGG CCACGACCTT CAACCTTTCC ATCCCGCTAA AACTTTTCCC CTAGAATTTT CTGTTTCTCC AGAGGAGCGG GCTGTTCGAA GCCAGGAACT TACCGCCAGC TATTTTTCCT TTCTAGCGGA ATCGTCACAA ATTCAGCCTA AGGAAAATAT GCTTTCCAAG CCTAAATCGC TCTCCCAATG GTCCGCAAGC TTGCCCAAGA GGCGGTACTA G
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Protein sequence | MKKTRLPLQR KAQLHPSKEE KTPLSQQELL RISQETRDCF LPPASPDKTQ LGLMVVNPYR VYAYWSILNQ DLIRAHKKLG IKKSAQWALR FYDFTAGKLA ISSSFEVAIP RKAHHWYIDL WADNKHYMAE LGLADSEDQF VALARSNMIE TPRAGSADPT APVIFTGHDL QPFHPAKTFP LEFSVSPEER AVRSQELTAS YFSFLAESSQ IQPKENMLSK PKSLSQWSAS LPKRRY
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