Gene Nmul_A1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmul_A1728 
Symbol 
ID3786205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosospira multiformis ATCC 25196 
KingdomBacteria 
Replicon accessionNC_007614 
Strand- 
Start bp1975287 
End bp1976378 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID637811815 
Productsecretion protein HlyD 
Protein accessionYP_412418 
Protein GI82702852 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0143164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGG TCACTAAATT ATCCATCGTT CTAGGCTTAA TCGCCACTCT GGTATTGAGT 
GGATGCCAAA AACACGACAC ACATGAAGAA ATGCCGCACT ATGCGGCAAC CACACCGTTC 
CGTGAAGACA CTTCCATCCT GGAACCCTAT GTCTGTCAGA TTCGCGCCAT CAGACATATT 
GAAGTCCGCT CTTTGGAAAA GGGCTATTTA ACCCATATTT TTATAGACGA AGGGCAATGG 
GTAAAAAAGG GACAACCCAT GTTCAAAATC ATGCCCAACG TCTATCAGGC AGAACTTCTA 
ACTGCGGAAG CTGAAGCGCA AAATGTGAAC ATCGAATACC TCAATACCAA GGCCTTGGCT 
GATAAGAATA TCGTATCAGC CAATGAATTG GCTTTGGCAA AAGCAAAATT AGATAAGGCT 
AACGCGCAGG TGAACTTGGC GAAAACCCAC TTGGGGTTCA CCGATATCAG AGCACCCTTT 
GATGGGATTA CGGATCATTT GGCTGTTAGG ATCGGCAGCC TTCTGGATGA AGATGATTTG 
TTGACGGAGT TGTCTGATAT CGCCCACTTG TGGGTCTATT TCAACGTCCC GGAAGCTAAA 
TATCTGGATT TTATAAGGCG CGAAAAAGGC AAAACCAATG AAAAAGTGCA GTTAAGGATG 
GCAAATGGCG AGATTTACGA GCATACGGGG GTCATCGAGA CAATTGTAGG TGATTTTTAT 
AATACCTCCG GCAACATTCA GTTTCGTGCC TTGTTCGAGA ACCCGGACAG GGTTCTCAGG 
CATGGTCAGA CAGGAACAAT TCTGATGACC GTACCTTACC CAAACGCCAT GCTCATCCCT 
CAAAAAGCGA CGTTCGAAAT CATGGATAAA ATCTATCTCT ACGTCGTCAA CAAAGAAGAA 
AAAGTGGAGC AAAGGCTTAT CCAGATAGAG GCCGAGTTGC CCCACATGTT TATTGTTAAA 
AGCGGCGTGA ATGACGGCGA GAGGATTTTG ATCGAGGGTA TGCGCAAAGT TAGTCCTGGA 
GACAAGGTTA TGATCGATTT AAAGCCACCC CAAGAGGTTC GCTCAGAGTT GATGAAATTG 
TATACCGAGT AA
 
Protein sequence
MKMVTKLSIV LGLIATLVLS GCQKHDTHEE MPHYAATTPF REDTSILEPY VCQIRAIRHI 
EVRSLEKGYL THIFIDEGQW VKKGQPMFKI MPNVYQAELL TAEAEAQNVN IEYLNTKALA 
DKNIVSANEL ALAKAKLDKA NAQVNLAKTH LGFTDIRAPF DGITDHLAVR IGSLLDEDDL 
LTELSDIAHL WVYFNVPEAK YLDFIRREKG KTNEKVQLRM ANGEIYEHTG VIETIVGDFY 
NTSGNIQFRA LFENPDRVLR HGQTGTILMT VPYPNAMLIP QKATFEIMDK IYLYVVNKEE 
KVEQRLIQIE AELPHMFIVK SGVNDGERIL IEGMRKVSPG DKVMIDLKPP QEVRSELMKL 
YTE