| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0759 |
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| Symbol | rpoB |
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| ID | 3786495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | + |
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| Start bp | 880380 |
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| End bp | 884453 |
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| Gene Length | 4074 bp |
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| Protein Length | 1357 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637810845 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_411458 |
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| Protein GI | 82701892 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATT CGTTTACCGA GAAAAAACGT ATTCGTAAAA GTTTCGCCAA GCGTGCAAGC
GTCTTGCCGA TTCCCTTTCT TCTCGCTACG CAAATCGAAT CTTACGCTGC TTTCCTGCAA
GCCAACCTCG AACCTGACCA ACGCGCTCCG GAGGGGTTGC AAGCCGCCTT CCTGTCGATC
TTTCCGATCG AGAGTCATTC CAGGAATGCA CGCCTCGATT TTGTCAATTA CGTACTCGGT
GCGCCTCCTT TCGATGTGAA GGAGTGTCAA CAACGCGGCC TTACCTATGC TTCTCCCCTG
CGGGCGAAGG TGCGCTTGAC CATTATGGAT AAGGAGGCGT CCAAGCCGAC TGTCAGGGAA
GTGAAGGAGC AGGAGGTTTA CATGGGCGAG ATTCCGCTCA TGACGAATAC CGGCTCGTTT
GTGATTAACG GCACCGAGCG CGTGATCGTG TCCCAGTTGC ATCGTTCGCC CGGGGTATTT
TTCGAGCATG ACCGGGGTAA AACGCATTCA TCCGGTAAAT TGCTTTTTTC CGCACGTATC
ATTCCCTACC GCGGTTCCTG GCTTGATTTT GAGTTTGATC CCAAGGATTA TCTCTATTTT
CGGGTCGACA GGCGTCGCAA AATGCCTATT ACCGTGCTGC TGAAGGCCAT TGGATACACA
CCCGAGCAGA TCCTGGAGAA TTTCTTTTCT TTTGACTCTT TCCATATCTC GCGGAAAAGT
ATTCTTTTTG AACTGTTGCC GGAGCGTTTG CGGGGGGATA CCGCGCGCTT CGATATCCTG
TCGAAAAGCG GCAAGGTCAT CGTCCAGAAG GACAAGCGCA TTACTGTGAA GCATGTGCGC
GAAATGCAGC AGGCCGGCAT AGACAGGCTT GAGGTGCCGG AAGATTTCCT GTTGGGGCGG
GTGTTGGGCC ACAACGTAGT GGATAAGGAA ACGGGAGAAA TTCTCGCCCT TGCCAATGAT
GAAATTACGG AAACCTTGCT TGGCAAGCTG CGGGATGCCA ATGTAGAAGA GATCCGTACG
ATTTATACCA ATGATCTCGA TCAGGGCGCA TATATATCGC AAACGCTCAA GATAGACGAA
ACCGCAGATG AGATGGCCGC GCAGGTTGCT ATTTACCGTA TGATGCGCCC GGGTGAACCT
CCTACCGAGG AGGCAGTCAA AGCGCTCTTC ATCGGATTGT TCTATGCCCC CGAACGCTAT
GACCTCTCAG TGGTAGGGCG AATGAAATTC AACCGCCGGG TCGGTAAGAC AGAGTTGGAT
GGCCCGACCA CGCTATCCAA CGAAGATATT ATTGCAGTGA TCAGAATTCT GGTGGAACTC
CGTAACGGGC GTGGGGAGAT TGATGATATC GATCACTTGG GTAACCGTCG GGTACGCTCC
GTGGGTGAAT TGGCAGAAAA CCAGTTTCGC TCTGGCCTGG TGAGGGTCGA AAGAGCAGTA
AAAGAGCGTC TGAGCCAAGC CGAATCAGAG AATCTGATGC CGCATGACCT GATCAATGCC
AAGCCGGTAT CCGCTGCGGT GCGTGAGTTC TTCGGTTCCA GTCAGTTATC GCAGTTCATG
GACCAGACCA ATCCGCTCTC TGAAATCACT CATAAACGTC GCGTGTCCGC GCTGGGGCCG
GGTGGCCTCA CGCGCGAGAG AGCGGGGTTT GAGGTACGTG ACGTACACCC GACCCACTAT
GGGCGGGTAT GTCCGATCGA AACGCCAGAA GGCCCCAACA TTGGTTTGAT CAACTCGCTG
GCGTTATATG CCCAGACCAA TGAATACGGT TTCATGGAAA CGCCTTATCG CAAGGTAACA
GACGGTCTGG TCACTGACGA GATTCATTTT CTTTCAGCCA TTGAGGAGGG GCAGTATGTA
ATTGCCCAGG CAAACGCCGA ACTGGATGGA GATGGCAGAT TCACCAATGA CATCGTTTCC
TGCCGCCATA AGAACGAGTT TACTCTGGCG ACCCCCGACC GGATTGAATA CATGGACGTG
GCGCCTGCCC AGATTGTCTC GGTGGCAGCC TCGCTGATTC CCTTCCTGGA GCATGATGAC
GCCAACCGGG CATTGATGGG TTCCAACATG CAGCGGCAGG CGGTGCCTTG TCTGCGCGCC
GAGAAACCTC TGGTCGGAAC GGGCATCGAG CGCGTCGTTG CCGTCGACTC CGGCACCGCG
GTAAAGGCGG TGCGGGGCGG CGTGGTGGAT TATGTTGACG CAAGCCGTAT TGTGGTGCGG
GTGCACGACA TCGAGACGCG TGCGGGTGAA GTGGGCGTAG ACATCTACAA CCTCACAAAA
TATACGCGTT CAAACCAGAA CACCAATATC AATCAGCGGC CACTGGTGAA GGTGGGTGAT
GTGATCGCGC GCGGGGACGT GGTGGCGGAC GGCGCTTCCA CCGACAAGGG GGAACTCGCG
CTGGGACAGA ACATGCTGGT CGCGTTTATG CCGTGGACCG GTTACAACTT CGAGGATTCC
ATTCTCATTT CCGAGCGTAT CGTGGCGAAT GACCGCTTTA CCTCCATTCA TATCGAAGAA
TTATCGGTGG TAAGCCGCGA TACCAAGCTT GGAACCGAAG AAATTACCGG GGATATTTCA
AACCTGTCGG AGGCGCAGCT AGGCCGTCTG GATGCTTCGG GCATCGTGCA TATCGGCGCC
GAGGTGGAAG CTGGTGATGT GCTGGTGGGC AAGGTGACGC CCAAGGGGGA AACCCAGCTT
ACGCCGGAAG AAAAACTGCT GCGTGCAATT TTTGGCGAGA AAGCTTCCGA TGTGAAGGAT
ACTTCCCTGC GAGTGCCATC CGGCATCTCC GGAACGGTGA TCGATGTACA GGTCTTCACC
CGGGAAGGCA TTGAACGGGA CAAGCGGGCG CAGCAAATCA TTGACGATGA GCTGAAGCGG
TATAAGAAAG ATCTGGCCGA TCAGATGCGG ATCGTGGAGG CTGACGCATT TGTCCGGATC
GAGCGCCTGC TCATCGGCAA GATTGCCACA GGCGGTCCCA AAAAGCTCGC CAAAGGTGCG
ACCCTCACCA AGGAATATCT GGAAAGCATT GACCCGCACC ATTGGTTCGA CATACGGCTG
GCAGATGAAG GGGCGAGTGT ACAGCTCGAA CAGATTGAAG AGGGCTTGGC GCAAAAACGC
AAGGCATTCG ATGCAGCCTT CGAGGAAAAG AAAAAGAAGC TCACCCAAGG CGATGAGTTG
CCTCCAGGCG TGCAGAAAAT GGTCAAGGTA TACGTCGCCG TGAAGCGTCG CCTTCAGCCG
GGAGACAAAA TGGCCGGCCG TCACGGCAAT AAGGGGGTCA TTTCGAAGAT CGTGCCAGTG
GAGGATATGC CTTATATGGC CGATGGCACT CCCGTGGATG TGGTGCTGAA TCCGTTGGGC
GTGCCGTCCC GCATGAACGT GGGGCAGATC CTGGAGACAC ATCTCGGCTG GGCGGCTAAA
GGTCTGGGCC AGAAGATTGG TGATATGCTG CGTGCGGGCA AAGAGATCGT CGAGCTGCGA
GCCTTTCTTG ACAAGATATA TAACACCAGT GGAAAACCGG AAGATATCGC CTCCTTGACC
GACGGGGAGA TCGCGGATCT GGCACAAAAT CTCCAGGATG GAGTGCCCTT CGCCACACCG
GTATTTGATG GCGCCACGGA GCAGGAAATC AAGGACATGC TTGAACTTGC CGGTTTACCG
CGTTCAGGAC AGGTGACCCT TCATGATGGC CGTACCGGGG AGGCCTTCGA TCGTCCGGTT
ACCGTCGGTT ACATGCATGT GCTGAAGCTG CACCACCTGG TGGACGACAA GATGCACGCC
CGTTCAACCG GTCCTTACAG CCTGGTTACC CAGCAGCCGC TCGGAGGCAA AGCCCAGTTC
GGGGGCCAGC GTTTCGGAGA AATGGAGGTG TGGGCGCTCG AAGCGTACGG ATCCGCCTAT
ACGCTGCAGG AAATGCTGAC AGTCAAATCG GACGATGTGA ACGGGCGCAC GAAAGTATAC
GAGAGCATTG TGAAGGGCGA CCACAAGATC GATGCAGGCA TGCCGGAATC CTTCAACGTG
CTGGTGAAGG AAATCCGGTC CCTGGCCATG GATATCGACC TGGAGCGGCA TTAG
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| Protein sequence | MSYSFTEKKR IRKSFAKRAS VLPIPFLLAT QIESYAAFLQ ANLEPDQRAP EGLQAAFLSI
FPIESHSRNA RLDFVNYVLG APPFDVKECQ QRGLTYASPL RAKVRLTIMD KEASKPTVRE
VKEQEVYMGE IPLMTNTGSF VINGTERVIV SQLHRSPGVF FEHDRGKTHS SGKLLFSARI
IPYRGSWLDF EFDPKDYLYF RVDRRRKMPI TVLLKAIGYT PEQILENFFS FDSFHISRKS
ILFELLPERL RGDTARFDIL SKSGKVIVQK DKRITVKHVR EMQQAGIDRL EVPEDFLLGR
VLGHNVVDKE TGEILALAND EITETLLGKL RDANVEEIRT IYTNDLDQGA YISQTLKIDE
TADEMAAQVA IYRMMRPGEP PTEEAVKALF IGLFYAPERY DLSVVGRMKF NRRVGKTELD
GPTTLSNEDI IAVIRILVEL RNGRGEIDDI DHLGNRRVRS VGELAENQFR SGLVRVERAV
KERLSQAESE NLMPHDLINA KPVSAAVREF FGSSQLSQFM DQTNPLSEIT HKRRVSALGP
GGLTRERAGF EVRDVHPTHY GRVCPIETPE GPNIGLINSL ALYAQTNEYG FMETPYRKVT
DGLVTDEIHF LSAIEEGQYV IAQANAELDG DGRFTNDIVS CRHKNEFTLA TPDRIEYMDV
APAQIVSVAA SLIPFLEHDD ANRALMGSNM QRQAVPCLRA EKPLVGTGIE RVVAVDSGTA
VKAVRGGVVD YVDASRIVVR VHDIETRAGE VGVDIYNLTK YTRSNQNTNI NQRPLVKVGD
VIARGDVVAD GASTDKGELA LGQNMLVAFM PWTGYNFEDS ILISERIVAN DRFTSIHIEE
LSVVSRDTKL GTEEITGDIS NLSEAQLGRL DASGIVHIGA EVEAGDVLVG KVTPKGETQL
TPEEKLLRAI FGEKASDVKD TSLRVPSGIS GTVIDVQVFT REGIERDKRA QQIIDDELKR
YKKDLADQMR IVEADAFVRI ERLLIGKIAT GGPKKLAKGA TLTKEYLESI DPHHWFDIRL
ADEGASVQLE QIEEGLAQKR KAFDAAFEEK KKKLTQGDEL PPGVQKMVKV YVAVKRRLQP
GDKMAGRHGN KGVISKIVPV EDMPYMADGT PVDVVLNPLG VPSRMNVGQI LETHLGWAAK
GLGQKIGDML RAGKEIVELR AFLDKIYNTS GKPEDIASLT DGEIADLAQN LQDGVPFATP
VFDGATEQEI KDMLELAGLP RSGQVTLHDG RTGEAFDRPV TVGYMHVLKL HHLVDDKMHA
RSTGPYSLVT QQPLGGKAQF GGQRFGEMEV WALEAYGSAY TLQEMLTVKS DDVNGRTKVY
ESIVKGDHKI DAGMPESFNV LVKEIRSLAM DIDLERH
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