| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0536 |
|---|
| Symbol | |
|---|
| ID | 3784525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 617543 |
|---|
| End bp | 619396 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637810618 |
|---|
| Product | ribonuclease II |
|---|
| Protein accession | YP_411236 |
|---|
| Protein GI | 82701670 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0557] Exoribonuclease R |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTTT TTTACGAAGA GGAAGGCACC TTCAAGGTAG GTGCGGTTCT TGCCGATAAC
ATGACTTCGC TGCAAGTGGA GGCGCCTCAC GGCAAGCGCG CAAAAATAAA GGCGGCCTCC
GTGCTGCTGC GGTTTGACGC GCCCTCATTG ACTGAATTCA TGGATGTCGC GCAAAAAAAG
GCGGAAGATC TTGACCCGAA TTTTCTCTGG GAATGTTGCG AGAGCGAGGT CGAATTCGCC
AGCGATGCGC TTGCAGCAGA TTATTTCGGC GATCGGGTGA CACCGGAAGA AGCTGCCGCG
GTATTGATCC GGCTGCACAG CGCGCCGATG TATTTTTACA AGAAAGGGCG CGGCCGCTAC
AAGGCTGCCC CGCCGAAAGC GCTGGAAGCG GCGCTTGCCA GCCAGGAGAA AAAGCGCCGT
CAGGCGGAAC AGCAGGCCCG TTACATGCAA TCGCTGAGCG AATTCGTTCT CCCGGAAGAA
TTCAAGCCGT CACTGTTCAA TCTGCTCTAT CGTCCGGAAA AAAATTCCGT CGAGTGGAAA
GCGCTGGATG CCGTTTGTGC CGCGATGAAA CTGAGCGTTT CCCAGTTACT GCAAAAGTGC
GGGGCGATTC CTTCCACGCA TGACTATCAT CTCAACCGTT TCCTGCTGGA GCATTTTCCC
GAGGGTACCG ATTTCGATGA CCTGGGCGCT GACCAATTGG CGGTTCTGCC CGATCTGCCG
GTAGCGGATG TGACTGCTTT CAGCATCGAT GATGTCACCA CCACTGAAAT TGACGATGCC
TTTTCCGTTA CGCCGCTGAC CCTGGGAAGT TTCCGCATCG GCATTCACAT TGCCGTACCC
ACCTTGGGCA TTGCGCCAGG TTCGCCTCTG GACAAGGTGG CGGAGCAGCG TGTCTCAACC
GTATATATTC CGGGCAACAA GATCACCATG TTGCCCGAAC CTGTGATACA GCAGTACACG
TTGAGCGAAA AACAATTGCG TCCCGCTGTT TCGATGTATC TGGACGTGGC CGATGATTTC
ACGGTGACTG CCACCACCAC CCGCGTCGAG CAAGTAAAGG TTGCAGCCAA CCTCCGCCAC
GACACGTTGG AGGAGCAATT CAATGAATCT ACCCTGGCTG GAGGAAACAT CAATCATCCC
TTCGGCAGGG AACTGACCGC ATTATGGAAT TTTGCCCGGA AGATGGAAGC GCTCCGGGGC
AAGACCAACG ACAGCAATAA CGAACGCATC GATTACAACT TCAATCTTCA TGGCGACCAT
ATCGTGATTA CCGAGCGCCG CCGGGGCTCG CCCATCGATA AGGTAGTGTC TGAGTTGATG
ATTTACGTGA ATGCGGAATG GGGCCGGCTG CTTGCGGATA GCGGAGTGGC CGGCATCTAT
CGCAGTCAGG GCAATGGCAA GGTCAGAATG AGCACGTCAC CGGCGCCGCA TCAGAGTCTC
GGGGTTTCCC AGTATGCCTG GATCAGTTCG CCTATGCGCC GCTACGTGGA TTTCATCAAT
CAGCGGCAAC TGGTTGGGTT GCTGCGAGGA GAAGAACCTC CTTATACGAG GGAGAGCGAG
AGCCTGCACA TGTTCATGCG GAATTTCGAG TCCACTTATG AGGTGTACGG CGATTTTCAA
CGCTCGATGG AACGCTACTG GTGCTTGCGC TGGTTATTGC AGGAAAATGT TCAGGTAACA
GGCGCGCAGG TACTGAAGGA AAACCTGGTG AAGCTCGATC GCCTGCCGCT TGTAGCGCGT
GTCGCGTCGT TGCCGGAGCT GCCGTCGGAA ACGGCTGTCG AGGTTGAAAT CTCGAATATC
GATCTGCTGG AACTTACTTT CAGTATAAAA TTCCTGAGAA AACTGCAAGC TTGA
|
|---|
| Protein sequence | MNVFYEEEGT FKVGAVLADN MTSLQVEAPH GKRAKIKAAS VLLRFDAPSL TEFMDVAQKK
AEDLDPNFLW ECCESEVEFA SDALAADYFG DRVTPEEAAA VLIRLHSAPM YFYKKGRGRY
KAAPPKALEA ALASQEKKRR QAEQQARYMQ SLSEFVLPEE FKPSLFNLLY RPEKNSVEWK
ALDAVCAAMK LSVSQLLQKC GAIPSTHDYH LNRFLLEHFP EGTDFDDLGA DQLAVLPDLP
VADVTAFSID DVTTTEIDDA FSVTPLTLGS FRIGIHIAVP TLGIAPGSPL DKVAEQRVST
VYIPGNKITM LPEPVIQQYT LSEKQLRPAV SMYLDVADDF TVTATTTRVE QVKVAANLRH
DTLEEQFNES TLAGGNINHP FGRELTALWN FARKMEALRG KTNDSNNERI DYNFNLHGDH
IVITERRRGS PIDKVVSELM IYVNAEWGRL LADSGVAGIY RSQGNGKVRM STSPAPHQSL
GVSQYAWISS PMRRYVDFIN QRQLVGLLRG EEPPYTRESE SLHMFMRNFE STYEVYGDFQ
RSMERYWCLR WLLQENVQVT GAQVLKENLV KLDRLPLVAR VASLPELPSE TAVEVEISNI
DLLELTFSIK FLRKLQA
|
|---|
| |