| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0340 |
|---|
| Symbol | |
|---|
| ID | 3785965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 372407 |
|---|
| End bp | 373327 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637810416 |
|---|
| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
|---|
| Protein accession | YP_411040 |
|---|
| Protein GI | 82701474 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTAC ATATCCAGAC ACCATTAATT GAATCGCGCC CTTTAAGCGA CAGAACCGGA
CATTCAGTCT GGCTGAAAAT GGAAATCGCC CAGCCCTCCG GCTCTTTTAA AGCCCGGGGA
ATCGGGTATG CGTGTGAAGA ATATTTCCGG CGCGGGGCAA AACGCTTCAT TTCATCATCT
GGCGGAAACG CCGGCCTTGC GGTTGCCTTT GCCGGACGTA ATCTGTCCGT GCCGGTGGTT
ATCGTTGTGC CGGAAACCGC GTCGAAGCGC GCCAGGGAAC TGATGGCGCG AGAGGGCGCG
GAAGTGATCA TCCAGGGAAA ATCTCTCAGT GAGGCGAATG CTTTTGCGCG ATCGCTCGTG
CAACCTGAGG ACGCTTTTCT GCATCCCTTT GATGATCCGC TCATTTGGAC GGGTCATGCC
AGCATAATTG ATGAAATAGT CGATACAGGG CCAAAACCTG ATGTAATCGT CCTGTCCGTC
GGCGGAGGCG GTCTTCTGTG CGGGGTTATA GAGGGACTGA ATCGGAATGA GTGGCAGGAT
GTGCCCATAA TCGCCGTCGA AACCCAAGGC GCGGACTCAT TTGCTCAGGC ACTCAATGCA
GGAGCGCTGG TGGAGTTGCC CAGGATATCA AGCATTGCGA CGACATTAGG GGCAAGTGCG
GTTTGCAGGC AGGCCCTCGA ATATTCGAGA AAACATCGCA TTGGGAGCGT CGTATTACCG
GACAAGCTCG CCGTTTCTGC GTGCATGCAA TTCCTGCGCG ATCATGATGC GGTGGTTGAG
CCCGCTTGCG GCGTAGCGCT GGCGGCGGTC TATGAAAGGG TTCCAGCTTT GTCCGGATAC
AAAAAAGTAT TGATTATCGT GTGTGGCGGT GTCAGCACTA CGGTTGACCA GTTACAGGAA
TGGTCGGCCG TGATGCAATA A
|
|---|
| Protein sequence | MPLHIQTPLI ESRPLSDRTG HSVWLKMEIA QPSGSFKARG IGYACEEYFR RGAKRFISSS
GGNAGLAVAF AGRNLSVPVV IVVPETASKR ARELMAREGA EVIIQGKSLS EANAFARSLV
QPEDAFLHPF DDPLIWTGHA SIIDEIVDTG PKPDVIVLSV GGGGLLCGVI EGLNRNEWQD
VPIIAVETQG ADSFAQALNA GALVELPRIS SIATTLGASA VCRQALEYSR KHRIGSVVLP
DKLAVSACMQ FLRDHDAVVE PACGVALAAV YERVPALSGY KKVLIIVCGG VSTTVDQLQE
WSAVMQ
|
|---|
| |