Gene Nmar_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1787 
Symbol 
ID5773997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1632871 
End bp1633092 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content35% 
IMG OID641317443 
ProductAN1-type Zinc finger protein 
Protein accessionYP_001583121 
Protein GI161529295 
COG category[R] General function prediction only 
COG ID[COG3582] Predicted nucleic acid binding protein containing the AN1-type Zn-finger 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTCTG AAAAGTGTGC ATATTGTGGG GATTTAACAG ATTTGCCATT CCAATGCAAT 
TACTGCAAGG ATCCATTTTG TTCAGAGCAT AGACTTCCTG AAGAACATAG ATGTGTAAAA
TTAAGTCAGA TTAGAGCAAA ACGATTTGGT GAAAAAAAAG TTATCAGAGA CGGAGGAAGA
GATAGGCCAA ATATTTTTAG AAGAATTTTT GGACGTTTTT AA
 
Protein sequence
MKSEKCAYCG DLTDLPFQCN YCKDPFCSEH RLPEEHRCVK LSQIRAKRFG EKKVIRDGGR 
DRPNIFRRIF GRF