Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1717 |
Symbol | |
ID | 5774518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1574377 |
End bp | 1575357 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641317371 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_001583051 |
Protein GI | 161529225 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0358933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTAAAT TTGTTAGACG CCTACAAAGA ATTGGAAGTA GCATCTTAGT ATCACTCCCA AAGGAATGGG TTGATGCAAA CAAACTAGAC AAAAGTAGTC AGGTTGAGCT TGAAACTGGT CAGGATAATA TCTCAATTTC TGCAAACAAA GAAACTCGTC CAACAAAAGA ACTTGTAATC TCATATCCAT TGCCAAAAGA AGAAAACATT GTAGCTGACA TTACAGGTGG ATATCTTTTA GGATATGACA TTATTGAGAT TACTTCTGAT TCTATAATTC CTGGTGAAGA TAGAGAAAAA ATTCGTAATT CTATGAGAAG ACTTGTTGGA ATGGAAATAA TTGAAGAAGA TGCATCACAC ATCAACATGC AGTTTCTATT AGATTCCACC ACACTTAATC CTCAAAAAAT ACTCAAACGT ATGAGTTCTA TTGCAATTGG AATGTATGAT GATGCAACAA ATGGATTAAT TGCAGATGAT AAATCAAATT TGCAAACATT ATCAAAACGT GATGAAGAAG TAAATAGACA ATATTTCTTA CTTGTAAGAT TAATTCGTAG CACTCTTGTT GATAAGAGAC TAGCAAATGC ATTTAATTTA GAAAATATTG ATGTTCTTGA TTATAGAGTT GCAGCCAATC TTCTTGAAAA TACTGGTGAT TCTATTGTAG AGTTATCTGA TTTTATCTAC AACTCTTCTT TGTCAAAAGA CCAATACAAA AAAATCCATG ATGTTGTAAA AAACTTTAAT CAATTAGCAG AAAAATCAAT TGATGCTTTT ACAAAACCTG ATAGGCTATT AGCAATTGAA GCAATATCTC TACACAAAAA ATTTGAAGAC CAGCTTTCTA AACTTAGAAC CTCATTAGGC ACTAAAAAAG AAATTCCAAT TGATTTTCTT GATATGGTGT TTATGTTTGA GAGAATTGCT CAATCTTGGG CTGATGTTGC AGATCTTGTT CAACCAATCT ATAACAAATA G
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Protein sequence | MTKFVRRLQR IGSSILVSLP KEWVDANKLD KSSQVELETG QDNISISANK ETRPTKELVI SYPLPKEENI VADITGGYLL GYDIIEITSD SIIPGEDREK IRNSMRRLVG MEIIEEDASH INMQFLLDST TLNPQKILKR MSSIAIGMYD DATNGLIADD KSNLQTLSKR DEEVNRQYFL LVRLIRSTLV DKRLANAFNL ENIDVLDYRV AANLLENTGD SIVELSDFIY NSSLSKDQYK KIHDVVKNFN QLAEKSIDAF TKPDRLLAIE AISLHKKFED QLSKLRTSLG TKKEIPIDFL DMVFMFERIA QSWADVADLV QPIYNK
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