Gene Nmar_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1717 
Symbol 
ID5774518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1574377 
End bp1575357 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content32% 
IMG OID641317371 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_001583051 
Protein GI161529225 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0358933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTAAAT TTGTTAGACG CCTACAAAGA ATTGGAAGTA GCATCTTAGT ATCACTCCCA 
AAGGAATGGG TTGATGCAAA CAAACTAGAC AAAAGTAGTC AGGTTGAGCT TGAAACTGGT
CAGGATAATA TCTCAATTTC TGCAAACAAA GAAACTCGTC CAACAAAAGA ACTTGTAATC
TCATATCCAT TGCCAAAAGA AGAAAACATT GTAGCTGACA TTACAGGTGG ATATCTTTTA
GGATATGACA TTATTGAGAT TACTTCTGAT TCTATAATTC CTGGTGAAGA TAGAGAAAAA
ATTCGTAATT CTATGAGAAG ACTTGTTGGA ATGGAAATAA TTGAAGAAGA TGCATCACAC
ATCAACATGC AGTTTCTATT AGATTCCACC ACACTTAATC CTCAAAAAAT ACTCAAACGT
ATGAGTTCTA TTGCAATTGG AATGTATGAT GATGCAACAA ATGGATTAAT TGCAGATGAT
AAATCAAATT TGCAAACATT ATCAAAACGT GATGAAGAAG TAAATAGACA ATATTTCTTA
CTTGTAAGAT TAATTCGTAG CACTCTTGTT GATAAGAGAC TAGCAAATGC ATTTAATTTA
GAAAATATTG ATGTTCTTGA TTATAGAGTT GCAGCCAATC TTCTTGAAAA TACTGGTGAT
TCTATTGTAG AGTTATCTGA TTTTATCTAC AACTCTTCTT TGTCAAAAGA CCAATACAAA
AAAATCCATG ATGTTGTAAA AAACTTTAAT CAATTAGCAG AAAAATCAAT TGATGCTTTT
ACAAAACCTG ATAGGCTATT AGCAATTGAA GCAATATCTC TACACAAAAA ATTTGAAGAC
CAGCTTTCTA AACTTAGAAC CTCATTAGGC ACTAAAAAAG AAATTCCAAT TGATTTTCTT
GATATGGTGT TTATGTTTGA GAGAATTGCT CAATCTTGGG CTGATGTTGC AGATCTTGTT
CAACCAATCT ATAACAAATA G
 
Protein sequence
MTKFVRRLQR IGSSILVSLP KEWVDANKLD KSSQVELETG QDNISISANK ETRPTKELVI 
SYPLPKEENI VADITGGYLL GYDIIEITSD SIIPGEDREK IRNSMRRLVG MEIIEEDASH
INMQFLLDST TLNPQKILKR MSSIAIGMYD DATNGLIADD KSNLQTLSKR DEEVNRQYFL
LVRLIRSTLV DKRLANAFNL ENIDVLDYRV AANLLENTGD SIVELSDFIY NSSLSKDQYK
KIHDVVKNFN QLAEKSIDAF TKPDRLLAIE AISLHKKFED QLSKLRTSLG TKKEIPIDFL
DMVFMFERIA QSWADVADLV QPIYNK