| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1708 |
|---|
| Symbol | |
|---|
| ID | 5773326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 1566629 |
|---|
| End bp | 1567009 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 641317362 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_001583042 |
|---|
| Protein GI | 161529216 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.151748 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTAG TAAAAGAAGT GATAAAAGAA ATTGGAAACA AATCACGAGA ATTTTACGAA
TTTGTATTAC CACCAATTGA CATGTATCTT AATGATGACA ACCTCAAAGT GGTTATTGAC
ATCCCAGGAT TCTCAAAAAA AGATATCAAA CTAACATTAT GTGGTGACAT TCTATCAATT
CAAGCATGCA AAGAAGTAGA TGAGAAAGAA TCTGAATCAT TGATTTCAAA ACAGAGACCA
AACATCATTG ATAAAAAAAT CAGACTACCA ATTGATATCA AACAAGGTGA AGAAAAAATA
GATTCAGCAA AATATGAAGA TGGTGTATTA ACACTAGTAA TCCCTGTAAC TAAAAAGGGA
AAAGATATCT CAATAGAATA A
|
|---|
| Protein sequence | MGLVKEVIKE IGNKSREFYE FVLPPIDMYL NDDNLKVVID IPGFSKKDIK LTLCGDILSI
QACKEVDEKE SESLISKQRP NIIDKKIRLP IDIKQGEEKI DSAKYEDGVL TLVIPVTKKG
KDISIE
|
|---|
| |