Gene Nmar_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1664 
Symbol 
ID5774141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp1522483 
End bp1522974 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content31% 
IMG OID641317318 
ProductDtxR family iron dependent repressor 
Protein accessionYP_001582998 
Protein GI161529172 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGCA AATCAAATAT CAAGATATCT GATAAAAAAG AAAAAAGATT AGAATCCATA 
AAAAAGGCTC ATGGTAAAAA AAATACATTT ACAACTACCA TGGAGGATTA TCTTGAGGTA 
ATTTCTGAAC TAGTAGAACT AAAAGGATAT GCTTCACCCA CAGATATCTC AAATTACATG 
AATGTCCGAC CTCCAAGTGT AACTAAAATG CTACGTCGCC TAGATGCTGA TGGTTATTTA 
GAATATACAA AATATCAGGG ACTGAAACTA ACTTCTAAAG GAATGAATAT TGCAAACGAT 
ATTAGGCAAA AACATAGTGA TCTACTAGAT TTTTTTGAAA TTATTGGCGT TGACAGTTCC 
ATAGCAAACA AAGATGTGGA AGGAATTGAG CATCACATGA ACCCAAAAAC TATGAAACAG 
CTAAGAAAAT TTACCACTTT TCTAAAATCA AATCCAAATT TACTGCTTTC ATTTAACAAA 
GCAAATTTTT AG
 
Protein sequence
MVSKSNIKIS DKKEKRLESI KKAHGKKNTF TTTMEDYLEV ISELVELKGY ASPTDISNYM 
NVRPPSVTKM LRRLDADGYL EYTKYQGLKL TSKGMNIAND IRQKHSDLLD FFEIIGVDSS 
IANKDVEGIE HHMNPKTMKQ LRKFTTFLKS NPNLLLSFNK ANF