Gene Nmar_1492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1492 
Symbol 
ID5774756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1360309 
End bp1361319 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content39% 
IMG OID641317140 
Producthypothetical protein 
Protein accessionYP_001582826 
Protein GI161529000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.293244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTT ACAGATCAAA GTACTCTGAT AAGAAAAAGT CTGGCGGAGG ACGCAGAAGA 
GATGATACAC GTCGCTCTTT TAGAAATTCC AGAAATGACA GACGAGACTC TAGAGATGAC
AGATACTCTG GAGGAAGAAG AGAATCTGCA ACTGTAACTT GTGCTGATTG CGGAGATGAA
TGTCAAGTTC CATTTGTTCC AAGAAGTAAC AAACCAGTTT ACTGTGATGA TTGTTTTAGA
GAAAGCAGAC ACGAAAATTT GGGTGATGAC AGATATTCTC GAAATGACAG AAGAGAATCT
TATCGTGATG ACAGAAGAGA GTCTCGCAGA GACGACAGAT TCTCTAGAAA AAGAAAAGAA
TCTGCATTTG TAACTTGTGC TGATTGCGGA ACTGAATGTG AGATTCCATT TGTTCCAAAA
ACTGACAGAC CTGTTTACTG TAGTGATTGT TTCAAACAAA ACAAACCTCA AGACAATGAA
TATGAGAAAT TTTCCAGAGA TGACAGAAGG GAATCTCGCA GAGATGACCG CAGAGAATCA
AGACGAGATG ACAGAAGAGA GTCTCGCCGT GATGACAGAT ACTCTAGAGA CAGAAGAGAA
TCTAGCAGAG ACAACAGAAG AGAATCAGGT AGAGATAAAC CTCGAAAACT AAGAAATGAT
AAACTCTCCA AAAAACGAGA GAGCTTTTTC AGTAATGGTT CAGATAAATT CTATGCAACA
ATAAAAGAAA AATTATTTGA AATCTTGGGA GGTAAAGCAT GTTCTAGTTG TGGATTCAAA
GATGAAAGAG CCTTGGGATT TAGCCCCATT TCTGATGACT CTTCTTTTGA TGAAATTGGA
CGTGGTGGTT CTGCTTCGTC TTGGGGAAAA TACATCTCAG ATCCTGACTT GGCAAGAGAA
GAACTCAAGG TATTGTGCTT GAATTGCAAT GAGATCAGAC AACCAATTGC AAAACCAAAA
GAACAAAGTT CAAGACCTAA ACGCAAAAAA AGTAAGTTCT TCCCACGATG A
 
Protein sequence
MELYRSKYSD KKKSGGGRRR DDTRRSFRNS RNDRRDSRDD RYSGGRRESA TVTCADCGDE 
CQVPFVPRSN KPVYCDDCFR ESRHENLGDD RYSRNDRRES YRDDRRESRR DDRFSRKRKE
SAFVTCADCG TECEIPFVPK TDRPVYCSDC FKQNKPQDNE YEKFSRDDRR ESRRDDRRES
RRDDRRESRR DDRYSRDRRE SSRDNRRESG RDKPRKLRND KLSKKRESFF SNGSDKFYAT
IKEKLFEILG GKACSSCGFK DERALGFSPI SDDSSFDEIG RGGSASSWGK YISDPDLARE
ELKVLCLNCN EIRQPIAKPK EQSSRPKRKK SKFFPR