Gene Nmar_1298 details

Gene Information

• Locus tag: Nmar_1298
• ID: 5774673
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 1188243
• End bp: 1188863
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641316942
• Product: cytidyltransferase-like protein
• Protein accession: YP_001582632
• Protein GI: 161528806
• COG category: [I] Lipid transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0615] Cytidylyltransferase
• TIGRFAM ID: [TIGR00125] cytidyltransferase-related domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.000283099
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTTGGAAC AAAGTCAAAG AACAATTCTT TCTACAATTT ACGTATGCCA GATAGAGGGT 
ACTAATCCAA TTGAGAAAAT CAAAAGAAAA ACTGCATTTT CAGATGATCA AATCAATTCA 
AAGATTGAAG AGTTGATAAA AAAACAACTT GTCAATGAAG ACAAAAAAAC ACTAACAGAA 
TCAGGGCGAG ACTCGTTGAA AGTAGTTTTG GCTGGAGGTG TTTTTGATAT TATTCATCCA 
GGACACATCC ACACCCTTAA TGCTGCAAAA GAGCTAGGAG ATGCTCTTGT GGTAGTTGTT 
GCAACAGACA ATACAGCAGT AAAAATGAAA AAAAGAAGAC CATTACATTC TCAAGAACAA 
AGACAAGAGT TGGTAAATTC ACTATCTATG GTAGACCTTT GTCTAATTGG ACAAGAAGAT 
GATATTTTCA AGACAGTAAA CAATGTCAGA CCACAAATAA TCGCATTAGG ATATGACCAA 
GCTCATCAAG AGAAGTTCAT TACAGAGGGA TGCAAAAAAA TCAATCTTGA TGCAAAGGTT 
GCAAGATTGC AATCCCCAAT TCCAGATAGT TCTAGCTCAA AAATTGAGAA AGAATACGGC 
GAATCAATCC ATGGGATTTG A 

 

Protein sequence

MLEQSQRTIL STIYVCQIEG TNPIEKIKRK TAFSDDQINS KIEELIKKQL VNEDKKTLTE 
SGRDSLKVVL AGGVFDIIHP GHIHTLNAAK ELGDALVVVV ATDNTAVKMK KRRPLHSQEQ 
RQELVNSLSM VDLCLIGQED DIFKTVNNVR PQIIALGYDQ AHQEKFITEG CKKINLDAKV 
ARLQSPIPDS SSSKIEKEYG ESIHGI