| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1238 |
|---|
| Symbol | |
|---|
| ID | 5773524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1134603 |
|---|
| End bp | 1134995 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641316882 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001582572 |
|---|
| Protein GI | 161528746 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTTGGAT TATTTAGTAG AACTCCAAAA GATCCTAATC AAAAAAGAAA TCAAGAAAAA
TTCAAAGAAT TCAAGAAACT TGCCAAGCAA AAAAAGTATG ATGATGCTCT AAAATTAGGT
ACAGAATATC TTAGGATGGT TCCAAACAAC CACGATGCCT TGTTTACTGT AGGCGGAATC
TATTATCTGA AGAAAAAATA CAAAACTGCT ATTTCTCATT TTGATCAAGC ACTTGAAATT
GGTTCGTATG ATGTTGATGT CTTACTTTTG AAAGCATATT CACATCAAAA ACTAGGTGAA
AACAAACGTG CAATTCAATG TTGTGAAAAA ATCCAAGAAG TAGATCCTAA AAATAAAGCA
GCTTCTGAAT TATTATCTCA ATTAAATTCC TAA
|
|---|
| Protein sequence | MVGLFSRTPK DPNQKRNQEK FKEFKKLAKQ KKYDDALKLG TEYLRMVPNN HDALFTVGGI
YYLKKKYKTA ISHFDQALEI GSYDVDVLLL KAYSHQKLGE NKRAIQCCEK IQEVDPKNKA
ASELLSQLNS
|
|---|
| |