| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1182 |
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| Symbol | |
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| ID | 5774735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1080792 |
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| End bp | 1082114 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641316826 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001582516 |
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| Protein GI | 161528690 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT TTCAAGAATT AGGATTAAAA GAAGACATAC TGAAAGGATT AAACGATCTT
GGGTTTGAAG AAGCATTTCC AATTCAAGAA GCAGTAATTC CCGTATTACT TACAGGAAGA
GATGTTGTAG GGCAAGCACA TACAGGCTCT GGTAAGACTG CAGCATTTTC ATTATCAATG
CTACAAGAGA TTCAACCAAA AAATGGCATT CAAGGTTTGA TCATGGCACC AACAAGAGAG
CTTGCAATGC AGATTACAGA TGAAATCAAA AAATTTGGAA AATATACAGG AATCAAAGTA
GCTACAGTTT ATGGAGGGCA AGGCATGGGA CTCCAATTAG ATGCTCTGGA AAGAGGAGTA
GAGATTGTAG TAGCAACACC AGGTAGATTG ATTGACCATC TCAAAAGAGG TTCTATAGAG
CTTAGAGATG TCACACACAT TGTTTTGGAT GAAGCCGACA CAATGTTGGA TATGGGATTT
ATTGATGATA TTGGATTCAT TTTAGATTTA GCACCAGAAG ATAGAGTAAT GTCATTGTTT
TCAGCAACAA TGCCAACTGA AATTCTCAGA TTATCGGAAG AGTATTTGAA CAATCCAAAG
CAATTCTTGC TAGATGCAGA CGATCTTAGT GGAGAAGGAA TTGACCAATC ATATTTGGTC
ATTAAAGACA GAGACAAATT CAAGTATCTA ATTGACTTTA TCAAACCAAC AAAAGGCCAA
GCCATTGTAT TTTGTTCTAC AAAGTATAGA ACTAGAGATG TTGCAAAATT CCTACATCAA
GAAAAATTTG ATGCAGTAGC AATAGAAGGG GACATGTCAC AACATAGAAG AGAGCAATCT
ATGGGAAAAT TCCGTAGTGG AAAGGCAGAC ATTCTAGTAG CAACAGATGT TGCATCAAGA
GGTATTGATG TTCCTAGAGT AGAATTAGTA ATCAATTATG ATGTTCCAAA TCAGGAAATG
GCATATTTCC ATAGAATCGG CAGAACTGCA AGAGCAGGAG CAAAAGGTAA AGCAGTAACA
TTTGTTTCAT ATTCGTCTGT AGGGGATTGG AACCTCATCA AACGTCAAAT CAAAGTTCCA
ATCAAAGATT TGAATGAGGA AATGGGAATT GAAATTGCAA TTCCAGATCC ACTAAAAAGA
CAAATGCCAT CAAGAAGATA TGGAGGTCAA TCAAGATCAA ACTATTCTAG AGGGGGTCGT
TCTGGAGGAT ACGGAAGATC AGGAGGAAGA CGAGATTCCA GAGATGATAG AGGAGGAGGA
AGACGAAGAT ACAACGATAG AGGAAGTAAT AGAAACCACT ACGGTGGACG CAGTAGATGG
TAA
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| Protein sequence | MTKFQELGLK EDILKGLNDL GFEEAFPIQE AVIPVLLTGR DVVGQAHTGS GKTAAFSLSM
LQEIQPKNGI QGLIMAPTRE LAMQITDEIK KFGKYTGIKV ATVYGGQGMG LQLDALERGV
EIVVATPGRL IDHLKRGSIE LRDVTHIVLD EADTMLDMGF IDDIGFILDL APEDRVMSLF
SATMPTEILR LSEEYLNNPK QFLLDADDLS GEGIDQSYLV IKDRDKFKYL IDFIKPTKGQ
AIVFCSTKYR TRDVAKFLHQ EKFDAVAIEG DMSQHRREQS MGKFRSGKAD ILVATDVASR
GIDVPRVELV INYDVPNQEM AYFHRIGRTA RAGAKGKAVT FVSYSSVGDW NLIKRQIKVP
IKDLNEEMGI EIAIPDPLKR QMPSRRYGGQ SRSNYSRGGR SGGYGRSGGR RDSRDDRGGG
RRRYNDRGSN RNHYGGRSRW
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