Gene Nmar_1153 details

Gene Information

• Locus tag: Nmar_1153
• ID: 5774133
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 1054157
• End bp: 1054858
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641316796
• Product: high-affinity nickel-transporter
• Protein accession: YP_001582487
• Protein GI: 161528661

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 0.608233
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGATTAG GACTTGTAGT TGGAATTCAA CATGCATTTG AACCAGATCA TGTTGCTGCA 
GTAAGTACTC AGATATCAAA ATCAAAATAT CTGCAGAAAT CCGTAGGAGC ATCACTCAAA 
GAATCTCTTA CAAAATCATC TATTCTTGGC GCACTTTGGG GAGCAGGACA CACTACAACT 
CTAGTTCTGA TTGGATTTTT AGTATATGTA CTTGCAATAA CAATTCAGGA TCAGATCTTT 
TTTGGATTTG AGTTTGCAGT AGGACTGATG CTTGTATTTC TGGGAATAAC TACAATTGTT 
AATAAAAAAA TCCAACTCAA ACACAAACAC CCACATCAAC ACAAAGATGG AACTATTCAT 
CTTGATGAAC ATAATCATAA TGATTCTGAT CATAGACATG CTCACAAATC ATATTTGATT 
GGTTTAATCC ATGGGTTGGC AGGAAGCGGA AGTCTTGTAG TGTTAACTGC CACAACTTTA 
GAAAATATTG AACTGGTTTT GAGTTTTATT ATGATATTTG GAATTGGTTC GATGATTGGA 
ATGACTCTAG TTGGAGGTCT CATGGGAATA CCTCTTGTCT TTACTAGTAA AATTGGAATG 
ATTCAAAAGA CTTTCAGATA TGTATCGGGA ATATTCAGTC TTATTATTGG GTTTAACATA 
ATATTTCAGA TTGGAATTCT TGAGAATTTG ATTGCGTTTT AA 

 

Protein sequence

MGLGLVVGIQ HAFEPDHVAA VSTQISKSKY LQKSVGASLK ESLTKSSILG ALWGAGHTTT 
LVLIGFLVYV LAITIQDQIF FGFEFAVGLM LVFLGITTIV NKKIQLKHKH PHQHKDGTIH 
LDEHNHNDSD HRHAHKSYLI GLIHGLAGSG SLVVLTATTL ENIELVLSFI MIFGIGSMIG 
MTLVGGLMGI PLVFTSKIGM IQKTFRYVSG IFSLIIGFNI IFQIGILENL IAF