Gene Nmar_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1110 
Symbol 
ID5774084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1014829 
End bp1015773 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content37% 
IMG OID641316752 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001582444 
Protein GI161528618 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.906703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACAG TACGCATTCC AAAAGTTATC AACTTTGGAG AAGACGCACT TGGTCAAACA 
GAATATCCAA AAAATGCCCT AGTTGTTACA ACTGTTCCAC CAGAGCTCTC TGATAAATGG
TTAGCAAAAA TGGGAATTCA GGATTATATG CTGTATGACA AAGTAAAACC TGAACCATCA
ATTGACGATG TCAATACTTT GATTTCAGAA TTCAAAGAAA AGAAACCTTC AGTCCTAATT
GGATTAGGTG GTGGAAGTTC TATGGACGTT GTAAAATACG CTGCACAAGA TTTTGGTGTT
GAAAAAATCT TGATTCCAAC AACATTTGGA ACTGGAGCTG AAATGACAAC TTATTGTGTT
CTCAAATTTG ATGGTAAAAA GAAATTGTTA CGTGAAGACA GATTCTTAGC TGACATGGCA
GTAGTCGATT CATATTTCAT GGATGGTACT CCTGAACAAG TCATCAAAAA CTCTGTCTGT
GATGCATGTG CTCAAGCTAC CGAAGGCTAT GATAGCAAAC TTGGTAATGA CTTGACTAGA
ACTCTGTGTA AACAAGCATT TGAGATTCTT TATGATGCAA TTATGAATGA CAAACCAGAA
AACTATCCTT ATGGTTCAAT GTTATCTGGA ATGGGATTTG GTAATTGTTC AACAACCCTT
GGACATGCTT TGTCCTATGT GTTCTCAAAT GAAGGTGTAC CTCATGGTTA CTCCCTTTCA
TCCTGTACCA CAGTTGCTCA CAAACATAAC AAATCAATCT TCTATGATAG ATTCAAAGAA
GCAATGGATA AACTAGGATT TGATAAATTA GAACTCAAAG CTGATGTTTC TGAAGCTGCT
GATGTCGTAA TGACTGATAA AGGACACTTG GATCCAAACC CAATTCCAAT ATCAAAAGAC
GACGTTGTAA AATGTCTTGA GGATATCAAA GCAGGCAATT TGTAA
 
Protein sequence
MHTVRIPKVI NFGEDALGQT EYPKNALVVT TVPPELSDKW LAKMGIQDYM LYDKVKPEPS 
IDDVNTLISE FKEKKPSVLI GLGGGSSMDV VKYAAQDFGV EKILIPTTFG TGAEMTTYCV
LKFDGKKKLL REDRFLADMA VVDSYFMDGT PEQVIKNSVC DACAQATEGY DSKLGNDLTR
TLCKQAFEIL YDAIMNDKPE NYPYGSMLSG MGFGNCSTTL GHALSYVFSN EGVPHGYSLS
SCTTVAHKHN KSIFYDRFKE AMDKLGFDKL ELKADVSEAA DVVMTDKGHL DPNPIPISKD
DVVKCLEDIK AGNL