Gene Nmar_0990 details

Gene Information

• Locus tag: Nmar_0990
• ID: 5773690
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 864998
• End bp: 865576
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 641316629
• Product: hypothetical protein
• Protein accession: YP_001582324
• Protein GI: 161528498

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 0.381797
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAATCAG AATCAGGTAA AGACATTACA GATTACTACA AGCATCTTTC ACTATTCTGG 
ACAGATATTG TACATTTAAT GTCAAGTAAA CCACAGGCAT TAGCATCAAT TGGTCCAATG 
AGAGCATTTG CAGCTAATTC AAAGAAGATA TCAACTGAAC TCATTGAAAT CAACGAAGAT 
TTGATGGAGT TTAACAAACA CCTAACTGAA TACTATAAAC AACTTACAGA CACTTGGATA 
GATTCACAGA AAAAAGTCAA TCTAAAAGCA CCTGAAATTC CTCAAGATAT TGAACAAATA 
GAGGCAGTCA AAAGAATTTG GATTGACATA TTTGATAATG ATTTTACAGA ATTATTTGAC 
TCTGAAAAAT TTGGAGAAAA TTATGGAAAA TTAGTTTCAA AAGAATTAGA ATTAACAAAG 
CATTGGAACA ATATTGCAAA TGTAGTATTG CAATCAGTTA ATCTTCCAAG CAAAGAAGAA 
ATTGATGAAG TGTACAAAGA GATGCATTCA TTGAAAAAAA GAGTTGCAAA ATTAGAATTA 
GAGTTAAAGA AAAAGGAGAT GAAAAACAAT GCAAAGTGA 

 

Protein sequence

MQSESGKDIT DYYKHLSLFW TDIVHLMSSK PQALASIGPM RAFAANSKKI STELIEINED 
LMEFNKHLTE YYKQLTDTWI DSQKKVNLKA PEIPQDIEQI EAVKRIWIDI FDNDFTELFD 
SEKFGENYGK LVSKELELTK HWNNIANVVL QSVNLPSKEE IDEVYKEMHS LKKRVAKLEL 
ELKKKEMKNN AK