| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0976 |
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| Symbol | |
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| ID | 5773445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 852580 |
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| End bp | 853506 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641316615 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001582310 |
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| Protein GI | 161528484 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0429383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTAA ATAGAATAGT CTCATTCTTA CCTAGTGCAA CAGAATTACT ATACGAGTTT
GGAGTTCAAA ACAAAGTATA CGGAGTCACA CATGAATGCA AGTACCCTAG TGAGGCAATT
TCTAAACCAC AGGTAATTAG TTCAGTAATA GACTCTGAGA AATTATCAAG TAATGAAATC
AATACACAAA CATGTCAACT ACTCAATGAA GGAAAAGATA TTTTCATTTT AAATGAAAAA
AATCTAAAAG ATGCCAATCC AGATCTTATA ATTTCTCAAG AAACATGTGA GGTATGTGCA
GCATATACTA ATCAAGTAAA CAAAGCACTC CAAATTCTTG AGAGAAAACC AATAATTCAT
TCAATGGATC CTCACAACAT ATCAGAAATC ATAGAGTCAG TTATCAAATT AGGAAAAATT
TTAGAAGAAG AAAGTAAAGC AAAAGAGATT TCAGAGTCAT TAGAAAAAAG AATTCAAAAA
ATAAAAAATA AAGTTCATAC CAACATACCA AAAATTCTAG CAATCGAATG GATAGAGCCA
TTTTTTACAG CTGGTCATTG GGTTCCAGAA ATGATAGAAA TTGCTGGTGG AAAAAACACG
ATAAGCAAAA CAGGAGAACA TTCAAGACGT ATGGACTTTG AAGAAATATC AAATTCTGAT
GCAGACATTA TAATTCTCAT GCCATGTGGA TTTGACACAA AACGTACAGT TTCAGAATAC
AAAGACATTC TAGAAAGAGA TGAGAAATGG AACATGCTCA AGGCAGTGCA AAATCAGGCA
GTTTTTGCAG TGGATGCCAA TTCTTTTTTC AGCAAGCCCA GCATCAGAAC AGTTGAGGGA
ATAGAGATAC TTGCAAAAAT AATCCATCCA GAAACATTTG ATGATGTTAA TGTTTCAGAA
AATTCTTTTG CAAATGTTTA CCAATAA
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| Protein sequence | MTVNRIVSFL PSATELLYEF GVQNKVYGVT HECKYPSEAI SKPQVISSVI DSEKLSSNEI
NTQTCQLLNE GKDIFILNEK NLKDANPDLI ISQETCEVCA AYTNQVNKAL QILERKPIIH
SMDPHNISEI IESVIKLGKI LEEESKAKEI SESLEKRIQK IKNKVHTNIP KILAIEWIEP
FFTAGHWVPE MIEIAGGKNT ISKTGEHSRR MDFEEISNSD ADIIILMPCG FDTKRTVSEY
KDILERDEKW NMLKAVQNQA VFAVDANSFF SKPSIRTVEG IEILAKIIHP ETFDDVNVSE
NSFANVYQ
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