Gene Nmar_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0933 
Symbol 
ID5774113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp815086 
End bp815400 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content35% 
IMG OID641316572 
ProductDNA/RNA-binding protein AlbA 
Protein accessionYP_001582267 
Protein GI161528441 
COG category[K] Transcription 
COG ID[COG1581] Archaeal DNA-binding protein 
TIGRFAM ID[TIGR00285] DNA-binding protein Alba 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.24022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATG ACGAGACATA TGAACCGCAA GGTCACGAGC AGACCGAAAA GTCTGATGAA 
TCCATAGTGT ATATTGGAAA TGATCCTGTA ATGCAATCTG CATTAGAAGT ATTATCGATA
TTAGGAAATA AGAAAAAAAT CACAATCAAA TCAAAAGGGA ATTCCATACC AAATGCAGTG
GCAGTTGCAA ATATCATTAC AGAAAAGATG TTAAACGGGA ATTCCAAAGT AGAGAAAATT
AATCTCGATA CCGATGCAGC AGCAGGTATC GGAAGAATGA CTTCAACTAT AGAAATTATT
TTACTTAAGA TCTAG
 
Protein sequence
MLNDETYEPQ GHEQTEKSDE SIVYIGNDPV MQSALEVLSI LGNKKKITIK SKGNSIPNAV 
AVANIITEKM LNGNSKVEKI NLDTDAAAGI GRMTSTIEII LLKI