Gene Nmar_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0924 
Symbol 
ID5773913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp808540 
End bp809112 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content34% 
IMG OID641316563 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001582258 
Protein GI161528432 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAAACA ATCTCCGAGA TTCACTCAAA CCTACACTTG AAAAGATTGG TAAAGGATTT 
GCATCCACAG GACTGTCTCC TAATTTCTGG ACTGCAGTTG GTTTGGGCGT TGCATTTCTT
TCTGCAATAG TGTATGGACT TGGAATTGAA TTTGGATTAA TTATTGGAGG TATTTTGTTA
CTTGTTTCAG GATTCTTTGA TATGGTGGAT GGACAAGTTG CCCGTGTAAC TGGCAAAACA
TCTCAAAAGG GCTCGTATTT AGATTCAATG TTTGATAAAA TTGCAGAGAC TGCAATATTT
TTGGGAATTT TAGTTGGTGG ATATGCTGAA CCATATTTGG TATTACTTGC AATCACTTTG
TCACTATTGG TAAGTTATGC AAGAGCAAAA TCTGATGCAA TAAATGTAAA ATTACAAGGT
GTTGGAATTG GTGAAAGAGC AGAGAGGTTA CTTGTTATTG CAATTATTGG AATAATTGGA
TTTATGGAAA TAGCTGTTAT CATTGTAGTA ATAATTGCGG CAATAACATT AATTCAAAGA
ATGATTGTTA CTGCAAAAAA CATCAAAGAA TAA
 
Protein sequence
MLNNLRDSLK PTLEKIGKGF ASTGLSPNFW TAVGLGVAFL SAIVYGLGIE FGLIIGGILL 
LVSGFFDMVD GQVARVTGKT SQKGSYLDSM FDKIAETAIF LGILVGGYAE PYLVLLAITL
SLLVSYARAK SDAINVKLQG VGIGERAERL LVIAIIGIIG FMEIAVIIVV IIAAITLIQR
MIVTAKNIKE