Gene Nmar_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0906 
Symbol 
ID5774441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp791128 
End bp791799 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content34% 
IMG OID641316545 
Producthypothetical protein 
Protein accessionYP_001582240 
Protein GI161528414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.810234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAATT TTGCTCAGAT GTTGAAAATA AGAGAGCCCA CATTACTTGA CCGAGACGAT 
GGCCATTGGT ATCAGACAAA ATTTGATAAA ATTTACCCTT CCATAAACAC CATCTTGTCT 
GCAACTGCTC CTGAAGAAAA GAAAAATGGT TTGGCATCTT GGAAAGAAAA TGAACCTGCT 
CATCAATACA TCACTGCACA ATCTCAACAT ATTGGCACCC AGTCTCATCA AATCATTGAA 
GACTATTTGA GTAGAAATTT GAATTTAGAT GATTTTGATT TACTTCCTAT TGCTCATTTT 
CATAATCTAA AACCCTATTT GGAAAACATC TCTGATGTTA CATGTATTGA ACAACGAATG 
TATTCAGACA AACTAAAAGT TGCAGGAACC AGTGACCTTA TTGCAAAATA CAATGGAGAA 
TTATCTATTA TTGACTATAA AACAAAAAGA AAACCCCAAG TTGATGAATA CATGTATGAA 
TATTATTTGC AAACCACTTG TTATGCTCAA ATGTTTCAAG AAGTCACCGG CCAAAAAATC 
AATCAGGTAG TCATTCTTGT TAGTAGTGAA AAAAACACTC GACAAGAGTT TGTCAAAACC 
TGTGATGATT ATGTAGAACC TCTCTATGAG CGACTTGAAC AATACTATCT AAACAATGAA 
GTGATGTTAT GA
 
Protein sequence
MPNFAQMLKI REPTLLDRDD GHWYQTKFDK IYPSINTILS ATAPEEKKNG LASWKENEPA 
HQYITAQSQH IGTQSHQIIE DYLSRNLNLD DFDLLPIAHF HNLKPYLENI SDVTCIEQRM 
YSDKLKVAGT SDLIAKYNGE LSIIDYKTKR KPQVDEYMYE YYLQTTCYAQ MFQEVTGQKI 
NQVVILVSSE KNTRQEFVKT CDDYVEPLYE RLEQYYLNNE VML