| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0866 |
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| Symbol | |
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| ID | 5774312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 759537 |
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| End bp | 761462 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641316505 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001582200 |
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| Protein GI | 161528374 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0265876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTGATT TTGAGTTTGT TCCAACACAA AACCAAGTTG AAGAGTCCAA TATCTTTCGT
TTTATGCAAA AACATGGACT ATCATCACTA TCTGAACTAT CAAAAAAATC AAAAGATGAA
CTAGAATGGT TTTGGCAAGA AGTTGATAAA GACATCGGAG TAGTTTGGGA CTCTCCATAT
TCACAAATAC TTGATTCCTC AAATGGAATT GCGCATTCTA AATGGTTTGT AAATGGTAAA
ACAAACATCT ACAAATCTAC AGTTGAAAAA TTTGTAAAAT TAACTCCTGA TAAAACTGCA
TATCACTTTG TTTCAGAAGA TGGGGCAACA TCCAAACTCA CATACCAAGA ATTAGACAAC
AAAGTATCAA AACTTGCAAA TGGTCTCAAA TCACTTAGGG TCAAAAAAGG AGATGTTGTG
GCAATTTATC TTCCGATGAT TCAAGAAGCA ATTTTAGCAA TATTGGCTTC AGCTAAAATT
GGCGCAGTTC AAACTGTAAT CTTTTCAGGA TATAGTACTG AATCACTGCA TATTAGATTA
CAAGATTGTA ATGCGAAAGT TCTTTTTGTT TCAGACGGTT TTTGTAGAAA AGGAAAACCA
ATCTCTCAAA AAGAAACCGT GCAAAAAGCA ATTCAAGACA CATATGTTGA AAAAACAATT
GTAGTAAAAT ACAAAGGGGT GGACAAGTAT GAAAACTCTG AAAATATTGT ATTTTATAAT
GAATTGATAG AATCTCAAAA CCCTGATTGC CCTACTGAAA TAATGGATTC TGAGGATCCT
TTATTCATCT TGTATACTTC GGGTACTACT GGAAAACCAA AGGGTGTGGT ACATGTTCAT
GGTGGTTTTT CCGTATTTGC AGGACATCAG GCAGCATATT TGATAGATTT ACAGGCACAA
GATGTGTTAT TTTGGCCTGC AGATATTGGT TGGATTACTG GTCTTGTCTG GAATGTCTAT
GGATTGCTAA TCATGGGAGC AAGTTCCGTG ATTTATGACG GAGCATTAGA TTTTCCAAAA
TCTGACAGAG TATGGAAAAT TCTTTCAGAG TATAATGCAA CAATATTTGG AATCTCTCCT
ACTGCAACAA GATTATTCAA GAAAAATAAT GAAGAACCAT TACAAAATTT CTCATTAGAT
AAAATCAAAA ATATTCCAAC AACGGGTGAA CCACTTGATG AGGATTCATG GTGGTGGTTG
TTTGATAAAG TTGGAAACAA GAAAATTCCA ATAATGAATT TGTCTGGCGG AACTGAAATT
GGTGGTGCAA TGTTGTCTGT TTTTCCAGGG ATGAAACTAA AACCTTCAAC TGTTGGTATT
CCAGTTCCTG GAATGAACCT TGATGTAGTT GATAATGATG GAAATTCAGT CAAAAACAAA
AATGGCTATC TCATAATTAG ATCACCTTGG CCAGGAATGA CTCGGGGGTT ACTAAATGAC
AATGAGCGGT TCATTGAAAC TTATTGGTCT AGATTCAAAG ACATTTGGTT TCATGGGGAT
TATGTCTTTG TTGATCAAGA TGGTCTTTGG TATATGCGTG GAAGAACTGA TGATGTGATT
AATGTCTCTG GACACCGAAT GAGTACTGCT GAAATTGAAC ATATGGTAAT TTCACATGAA
AAAATTTCTG ATGCAGCATC TATTGCAATT CCTGATGATA TTACTGGCGA GGCTATTGTT
ATTTTCTTTG TTGCAGATAG TAAAGATGAT TCTAATTTGG AAGGTATAGT TTCTGATTTT
ATTTCTCAAA AGATTGGCAA AGTTGCAAAA CCAAAGTTTG TTTATCAATT GACTGATTTG
CCAAAAACTA GAACGGGAAA AATTATGAGA CGATTACTAA AATCAAAATT ATTGGGAAAA
GAGTTAGGTG ATTTGTCTTC TCTAGAGAAT CCTCAGATAC TAGATGAGGT TCCAAAAATT
GGTTAA
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| Protein sequence | MSDFEFVPTQ NQVEESNIFR FMQKHGLSSL SELSKKSKDE LEWFWQEVDK DIGVVWDSPY
SQILDSSNGI AHSKWFVNGK TNIYKSTVEK FVKLTPDKTA YHFVSEDGAT SKLTYQELDN
KVSKLANGLK SLRVKKGDVV AIYLPMIQEA ILAILASAKI GAVQTVIFSG YSTESLHIRL
QDCNAKVLFV SDGFCRKGKP ISQKETVQKA IQDTYVEKTI VVKYKGVDKY ENSENIVFYN
ELIESQNPDC PTEIMDSEDP LFILYTSGTT GKPKGVVHVH GGFSVFAGHQ AAYLIDLQAQ
DVLFWPADIG WITGLVWNVY GLLIMGASSV IYDGALDFPK SDRVWKILSE YNATIFGISP
TATRLFKKNN EEPLQNFSLD KIKNIPTTGE PLDEDSWWWL FDKVGNKKIP IMNLSGGTEI
GGAMLSVFPG MKLKPSTVGI PVPGMNLDVV DNDGNSVKNK NGYLIIRSPW PGMTRGLLND
NERFIETYWS RFKDIWFHGD YVFVDQDGLW YMRGRTDDVI NVSGHRMSTA EIEHMVISHE
KISDAASIAI PDDITGEAIV IFFVADSKDD SNLEGIVSDF ISQKIGKVAK PKFVYQLTDL
PKTRTGKIMR RLLKSKLLGK ELGDLSSLEN PQILDEVPKI G
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