Gene Nmar_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0820 
Symbol 
ID5773921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand+ 
Start bp724551 
End bp725285 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content30% 
IMG OID641316458 
Productpeptidase M10A and M12B matrixin and adamalysin 
Protein accessionYP_001582154 
Protein GI161528328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.101755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CACTAAATTC AAAGATTTTT TCTTGTATCC TTGCAGGATT TTTGATGTTA 
TCAATACCTG GTTTTATTCA AGATACTGAT GCAGTTGCTC CATTAACATC CAAGTTCCTT 
TCTCTTGAAA AAAATGGAAT CATAACTTCT GCATTTTGGA ATATTTTGCC TCATGAAGAA 
TTAGATGTTG TATTTTTAGG AAGTCATTTG TTAACTGATA AACAACTTGA TGCAGTTGTT 
TATGCATTAA CATCTCATGA CACAATTGAA TTAGATGATT CTGCTAATGA TAACTTGGTA 
AATTCTAAAT CTACCTATTA TTTGGGATGG GAAGGTGCAT TAACTGCTGC ACAAAATATT 
GATACGGAGA ATACAATTCC TACAAAATTC AATATTGTCT CAACATTGAG TGATAAAAAT 
AACATTGTAA TTCAATTTTC AAATTATAGA GAATCTGACG GATATTCTGG GTATGCACGA 
ATATTCACAC ATGATCGTGA AATTCTACAA TCTCATATTA TGATTTATGA TGTAGAAAAA 
CTGTCTGCTG AAGATTTGAC AACTATTATC AGACATGAAT TTGGACATGC TCTAGGTCTA 
GGACATTCTA TTGATTCAAA TGATTTAATG TCAAACATGA TTCTTACTGA AACTCCATAC 
ATCTCACAAT GTCACATAGA TGCTGTTAGA GATTTGTATG ATAATAATGA TGAAAACTTT 
ACAGTGTGTA ATTAA
 
Protein sequence
MKITLNSKIF SCILAGFLML SIPGFIQDTD AVAPLTSKFL SLEKNGIITS AFWNILPHEE 
LDVVFLGSHL LTDKQLDAVV YALTSHDTIE LDDSANDNLV NSKSTYYLGW EGALTAAQNI 
DTENTIPTKF NIVSTLSDKN NIVIQFSNYR ESDGYSGYAR IFTHDREILQ SHIMIYDVEK 
LSAEDLTTII RHEFGHALGL GHSIDSNDLM SNMILTETPY ISQCHIDAVR DLYDNNDENF 
TVCN